| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5065 |
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| Symbol | |
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| ID | 8728830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6188357 |
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| End bp | 6189730 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003389839 |
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| Protein GI | 284039909 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0442814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTAACG CAACCTCTAC CGATCAACCT TCCGATGCTG CATCGGCTGC TTTACCCCGT
CGGCTTACCC TTCTGCAAGG GACGGCACTG AATATGATCG ACATGGTGGG CATTGGCCCC
TTTGTTGTGC TTCCGCTGGT CATTAAAACC CTTGGTGGCC CGCTTTTTTT ATGGGCCTGG
GTATTGGGCG CGTTTGTTTC CCTGATCGAC GCTTTCGTCT GGGCAGAGCT GGGCGCTTCA
TTTCCACAGG CGGGGGGTAG CTATAATTTT CTGAAAATCT CGTACGGTGA ACGGAAATGG
GGCCGGTTGC TTTCCTTTCT CTATGTTTGG CAAACGCTTA TTCAGGCCCC TTTGGTGATG
GCGTCCGGAG CTATTGGCTT TGCCCAGTAT GCGTCGTACC TGATGCCCCT CGACGAATGG
CAGCGAAAAG CTGTCTCCGG CGGGGTCGTT CTGGTAATCA TCGTGCTGCT GTACCGAAAG
ATCGACTCAA TTGGGAAAAT AGGGTTGATC ATGTGGGGCG CTGTTCTGGT AACCCTCGGC
TGGATCATCA TTGGCGGGTT GAGCAACCCC CGTATCCCGC TGGCCGAAAC ATTTGAGTCG
ATTGGCTCCG TAAGCGGAGG TTTACTGGCC GCTGGTCTGG GACAGGCCTC CGTCAAGACC
ATTTATTGCT ATCTGGGATA TTATAACGTT TGTCATCTGG GCGGTGAAAT TCAGCGGCCC
ACCCGCAATA TTCCGGCCAG TATGTTTATC TCCATATTCG GGATTGCTGC CTTGTATTTA
TTAATGAATT TAAGCGTAGT AAGCGTGGTC CCCTGGCAGA TTGCTCAGAA CAGCGAGTTC
ATTGTCAGTA CCTTCGTAGA AACCTTGTAT GGCCCCCAGG CCGCCCAGCT GGCAACAGGA
CTTGTTCTGC TGGTTGCTTT TTCGTCGTTG TTTGCGGTTC TGCTAGGGTA CTCGCGGGTG
CCTTACGCTG CCGCTGCCGA TGGGCAATTT TTTCGGATTT TCGCTAAACT GCATCCTACC
CGGCAGTTTC CGTACATCTC GCTTTTATTT CTGGGCGGGC TTGGGTTTGT ATTCAGCCTG
TTATTCCGAC TGGGTGATGT TATTACGGCC ATTCTGGCCA TGCGGATTGT GGTGCAATTT
GTTGGTCAGG CCATCGGGCT GATGCTGTTG CATCGCAGGC GGGCAGCCTC GGAGTTCCCG
TTTCGGATGC CGCTTTATCC GTTGCCGGTT ATTTTGGTCA TTGGCATATG GCTGTTCATC
TTCTTTTCAA CGGGAGCAAA GTTCATGCTT TCCGGGCTAA CCGTTATTGC ACTGGGAATC
ATCGCCTTCC TCGTGTCAGC CGGCGTCCGA AAACAGTGGC CGTTTGAGAA GTAG
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| Protein sequence | MSNATSTDQP SDAASAALPR RLTLLQGTAL NMIDMVGIGP FVVLPLVIKT LGGPLFLWAW
VLGAFVSLID AFVWAELGAS FPQAGGSYNF LKISYGERKW GRLLSFLYVW QTLIQAPLVM
ASGAIGFAQY ASYLMPLDEW QRKAVSGGVV LVIIVLLYRK IDSIGKIGLI MWGAVLVTLG
WIIIGGLSNP RIPLAETFES IGSVSGGLLA AGLGQASVKT IYCYLGYYNV CHLGGEIQRP
TRNIPASMFI SIFGIAALYL LMNLSVVSVV PWQIAQNSEF IVSTFVETLY GPQAAQLATG
LVLLVAFSSL FAVLLGYSRV PYAAAADGQF FRIFAKLHPT RQFPYISLLF LGGLGFVFSL
LFRLGDVITA ILAMRIVVQF VGQAIGLMLL HRRRAASEFP FRMPLYPLPV ILVIGIWLFI
FFSTGAKFML SGLTVIALGI IAFLVSAGVR KQWPFEK
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