Gene Slin_5060 details

Gene Information

• Locus tag: Slin_5060
• ID: 8728825
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: -
• Start bp: 6173047
• End bp: 6176532
• Gene Length: 3486 bp
• Protein Length: 1161 aa
• Translation table: 11
• GC content: 50%
• Product: ASPIC/UnbV domain protein
• Protein accession: YP_003389834
• Protein GI: 284039904

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCAACA AACTCATTCT ACTCCCTATC ACCCTCTTCA CCCTATCCGC TTGCCACAAA 
CAACCAGACC CGCTGTTTGT GAAGTTGACA GCCGAAGAAA CGGGCGTCAA CTTCGTGAAT 
CGGAGCCTGG ACAAGAAGAA CTTCAACATC TTCAATTACC GCAACTTCTA CAACGGCGGG 
GGTGTCGCTA TTGGCGATGT GAATAACGAT GGGCTGCCCG ATCTGTTTCT GACCTCCAAT 
TTCGAGGAGA ACAAGCTTTA CCTTAACAAA GGGGGCATGA AGTTCACCGA TGTGACGAAG 
CAGGCGGGTA TCATCGGCAA AAAGTTTTGG TCTACGGGCG TCACTTTTGC CGATGTGAAC 
GGCGACGGAC TGCTCGATAT CTACGTCTGC AATTCGGGTA GCCGCGATGA GCGGGGCAAT 
CAGTTGTACA TCAATGAAGG AGTAAAGAAC GGGGTGCCCG TATTCACCGA AAAAGCAAAA 
GAATATGGCC TGTGGGACGG TGGTTTCTCG ACACATGCCG CCTTCTTCGA CTACGACCGC 
GATGGCGACC TGGACATGTA CCTGCTCAAT AACAGCTTCA CGCCAATGGA TCGGCTGGGA 
TACGCCAACA TGCGCGAAAC GCGGGATAAG CTGGGAGGGC ATAAGTTATT TGAAAATAGG 
AGTGAGGAGC ATTCTTTAAG TAGTGAGGAG CGAGTAGCGA GGAGTGGGGA GCCATCCGGC 
GGTAGTAAGA AGAAAGGGAG TCAGCAGGCT GGCAAGGAGG CCAAGCCGTT GTTTGTGGAT 
GTGTCGGAGG AGGCCGGGAT ATATGGGAGT TTGATCGGCT TTGGGCTGGG CATTACCATT 
GGCGATGTCA ATAATGATAA CTGGCTGGAT ATTTACATCT CCAACGACTT CTACGAGCGC 
GATTACCTCT ACATCAACCA GAAGGGTGGT CGGTCCGGCG TTCCGGCCTT CAAGGAAGAT 
ATTGAGAACG AAATGGGGCA CATTAGTCTG GCTTCTATGG GTGCCGATAT TGCCGATGTG 
AACAACGATG GCAACCTCGA TATTTTCGTG ACAGACATGC TCCCCGATGA TGATTACCGG 
CTGAAAACGA CTACCGCTTT CGAGAGCTAT GAGTTGGGTA AACTCAAGGA GTCCCGCGAT 
TTCTTTTATC AGGATTCGCG CAATATGCTA CACCTGAATA ACGGCGACGG TACGTTCTCG 
GAAATTGGTC GAATGGCGGG TACATCGGCT ACCGACTGGA GTTGGGGCGC TCTGTTGTTC 
GATATGGATA TGGATGGCCG AAAAGATATT TTCGTAGCCA ATGGTATTCT GAAAGACCTG 
ACCGACCAGG ATTACATGGC GTTTCTGGCC AGTAACCCCG ATTTACAGCC TATGATTGAA 
GGCACCAAGA AATTCGACTA TAAAGAATAC GTCGATAAAA TGGGGTCACG TCCGTTGCCA 
AATTACGCTT ATCGGAATAT GGGCGATGGT ATGAAGTACG AAAACAAAGC TGCCGACTGG 
GGGCTAGGCG AGCCCTCATT CTCAAATGGG TCGGCCTACG GCGATCTGGA TAACGACGGC 
GACCTGGACT TGGTTGTCAA TAACAACGAC GCACCCGTGT CGATTTTCGC CAATACATCG 
GTTGAGAAGA ATCATAAGAA CTTTCTGCGC GTACAACTCG ATGGGTATGG CTACAATCGG 
AATGCCATTG GTGCCAAAGT TTACGTGTAT CAGGAAGGGG CTAACGGGAA GCCGCAAACG 
CAGTTTTTGC AACAGATGCC CAACCGGGGA TTCGAATCGT CGGTCGATTT GACGATGGTG 
TTTGGGCTGG ACAATAACCC GGCTATTGAC TCGCTGGTGG TTATCTGGCC GGACGATAAG 
AAACAACTCA TCCGGCAGCC CAAAGCCAAT ACCACCTTGT CGCTGGCTCA TAAAAACGCC 
GATCAACGGG CATTATTCAG CACACCAGCC ATGCCGGGAA AACGGCTGTT TCAGGATATC 
ACCGAGTCGT CGAAGCTGAA CTATGTGCAT AAAGAAAACG AGTTTGTCGA TTATGATCGT 
GACGGGTTAC TAAAGCAAAT GTTGTCGCGC GAAGGCCCTG CGCTGGCCGT TGGCGACATT 
AATGGTGACG GGCTCGATGA CGTGTTTCTA GGCGGAGCTG TCGATATGCC CCGGTCTTTG 
TATGTTCAGC GGGCCGATGG AACATTCTAT CTGCAAAAAC AGCCGTTCTT GCTCGACGCC 
ATTTATACCG AAGATGTAGC GGCTACCTTC TTCGATGCTG ATGGTGATAA AGACCTGGAT 
TTGTATGTAG CCACGGGTGG CAACGAGTTT GCTGATTCGA CGTATACAGC TGACCGTTTA 
TATCTCAACG ATGGAAAAGG GAACCTTACC TGGAACAGAA CCCTGCCCCG GACTCTGGCT 
AATAACTCCT GCGTGGTTGC GGCTGATTTT GACCTCGACG GCGATCAGGA CCTATTTGTG 
GGAGCACGTA TGAACTCAGG TCGATACGGT CAAAATCCGG ACCAGTTGCT GTTGGTAAAC 
GATGGTAAGG GTAATTTCCG AAAAGCAACC AGGGAACTGA TGCCCTTCTC GGCAAACATC 
GGCATGGTTA CGGATGCTGT CTGGGCCGAT ATTGATCATG ACCGCTACCC GGATTTAGTT 
TTGGTGGGCG ACTGGATGCC CATCACCGTT CTGAGAAACA AGCGGGGAAA AGGGTTCGAA 
CAGGTTGATA GTGAAACGTT GACCAATTCG GGTGGTTGGT GGAACACCAT ACAGGCGGCT 
GATCTGGACA ATGACGGCGA TATAGATTTC ATAGCTGGAA ATCTGGGGCT TAATAGCCGT 
ATGGTGGCTT CGGTCGCTGA ACCGGCTCAC CTGTATAGCA ATGACTTCGA TCAGAATGGG 
TCATACGATC AAATCATCAC CTGCTTTAGA CCTACTACCG ATGGCCGAGA CGGCACTATG 
GAAACCCGCG AGTGCGTAAT GGTTCAGAAG CCGGATTTAC AGAAACGTAT TCCATCCATT 
AAAACCAAGT ACCTCAAGCA TGTTGATTAC GCCAAAGCAG GTCTTGAGGA TATTTTCTCT 
GCCCAGCAAC GGCAGGGAAT GACCGTTAAA ACGGTACAAA CGGCCGAAAC ATCGGTGCTG 
ATCAACGATG GCAAGGGAAA CTTTACCCGG AAGGCCTTAC CCGTGCAGGC GCAAACCTCG 
CCGATTCATG CCATTCTCAC CAATGACTAT AATGGCGACG GCAAGCAGGA TCTTTTGCTG 
ACCGGTAACT TCTTCGATGT ATTGACCGAA GTAGGTCGCT ATGATGCTAA TTATGGCTTG 
CTCTTAACCG GTGATGGTAA AGGTGATTTT GTGGCGGCAA AACCCGCTCA GACCGGCTTT 
TTTGTACGGG GGCAGGTTCG CCGGATGACG GCCGGGCGCG GTGCGAATGG AAAACCCTTT 
ATTGTACTGG CAAAGAACAA TGATAAAGCG CAAGTGTTTA CCACAGTAAA GACACTTACT 
CCCTGA 

 

Protein sequence

MINKLILLPI TLFTLSACHK QPDPLFVKLT AEETGVNFVN RSLDKKNFNI FNYRNFYNGG 
GVAIGDVNND GLPDLFLTSN FEENKLYLNK GGMKFTDVTK QAGIIGKKFW STGVTFADVN 
GDGLLDIYVC NSGSRDERGN QLYINEGVKN GVPVFTEKAK EYGLWDGGFS THAAFFDYDR 
DGDLDMYLLN NSFTPMDRLG YANMRETRDK LGGHKLFENR SEEHSLSSEE RVARSGEPSG 
GSKKKGSQQA GKEAKPLFVD VSEEAGIYGS LIGFGLGITI GDVNNDNWLD IYISNDFYER 
DYLYINQKGG RSGVPAFKED IENEMGHISL ASMGADIADV NNDGNLDIFV TDMLPDDDYR 
LKTTTAFESY ELGKLKESRD FFYQDSRNML HLNNGDGTFS EIGRMAGTSA TDWSWGALLF 
DMDMDGRKDI FVANGILKDL TDQDYMAFLA SNPDLQPMIE GTKKFDYKEY VDKMGSRPLP 
NYAYRNMGDG MKYENKAADW GLGEPSFSNG SAYGDLDNDG DLDLVVNNND APVSIFANTS 
VEKNHKNFLR VQLDGYGYNR NAIGAKVYVY QEGANGKPQT QFLQQMPNRG FESSVDLTMV 
FGLDNNPAID SLVVIWPDDK KQLIRQPKAN TTLSLAHKNA DQRALFSTPA MPGKRLFQDI 
TESSKLNYVH KENEFVDYDR DGLLKQMLSR EGPALAVGDI NGDGLDDVFL GGAVDMPRSL 
YVQRADGTFY LQKQPFLLDA IYTEDVAATF FDADGDKDLD LYVATGGNEF ADSTYTADRL 
YLNDGKGNLT WNRTLPRTLA NNSCVVAADF DLDGDQDLFV GARMNSGRYG QNPDQLLLVN 
DGKGNFRKAT RELMPFSANI GMVTDAVWAD IDHDRYPDLV LVGDWMPITV LRNKRGKGFE 
QVDSETLTNS GGWWNTIQAA DLDNDGDIDF IAGNLGLNSR MVASVAEPAH LYSNDFDQNG 
SYDQIITCFR PTTDGRDGTM ETRECVMVQK PDLQKRIPSI KTKYLKHVDY AKAGLEDIFS 
AQQRQGMTVK TVQTAETSVL INDGKGNFTR KALPVQAQTS PIHAILTNDY NGDGKQDLLL 
TGNFFDVLTE VGRYDANYGL LLTGDGKGDF VAAKPAQTGF FVRGQVRRMT AGRGANGKPF 
IVLAKNNDKA QVFTTVKTLT P