Gene Slin_5056 details

Gene Information

• Locus tag: Slin_5056
• ID: 8728821
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: -
• Start bp: 6160179
• End bp: 6163520
• Gene Length: 3342 bp
• Protein Length: 1113 aa
• Translation table: 11
• GC content: 52%
• Product: ASPIC/UnbV domain protein
• Protein accession: YP_003389830
• Protein GI: 284039900

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 30
• Fosmid unclonability p-value: 0.841506
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACCGCA TTCTTCTTTT TATCGGCGCA TTGGCGTTGA CGGGCTGTAA CTCCTTCAAA 
TCGGAAAAAC CCCTTTTCGA GTCGCTCGAT TCGACCCAAA CGGGCGTTGG GTTTGTTAAT 
AAGCTGGTGC CGACCGAAAA GCTCAACATT TTAGATTACC TCTATTTCTA CAATGGTGGG 
GGCGTTTCGG CGGGCGATAT AAACAACGAT GGCCTCACCG ATCTGTACTT CGTATCCAAT 
CAGGGAAAGA ATAAGCTGTA CCTCAACAAG GGAGATTTTA AGTTTGAAGA CATCACTGCC 
AAAGCGGGCG TCGAAGGATT TGCAGACTGG CAAACAGGCT CCACAATGGC CGATGTCAAC 
GGCGACGGTC TACTCGATAT TTACGTCTGC GCGGTGGGCA ATTTCCGGGG GCAGGAGGGC 
TCCAATGAAT TGTACATTAA TAACGGCGAC AATACCTTCA CCGAAAAAGC CGCTGATTAC 
GGACTGGACT TTACGGGTTT TTCGACCCAG GCCGCCTTCT TCGATTACGA CCATGATGGC 
GATCTGGATT GTTACCTGCT CAATCACGCT ATCCATACCT CCCGCAGTTA CGACCGCGTT 
TCTGCCCGAA ACTTACGCAA TAACGAATCG GGCGATTACC TGTACGAGAA CCAAAGCATA 
ACCAAATCCG GGCAAGCCCC TGCGGGTAAA ATCGCCCGGT TTCAGAACGT AAGTGAGCGG 
GCGGGTATCT TCGGCGCGGC AATGGGCTAC GGGCTGGGAG TTTCGGTCGC CGACCTGAAT 
AACGATGGGT GGGAAGATAT TTACGTCTCC AACGATTTCC ACGAAGACGA TTATTACTAC 
GTCAACAACC ACGACGGGAC CTTTACCGAA AGCGTAAAAA AAGCCTTTCA GCACACCAGC 
CGATTCTCTA TGGGAAACGA CATTGGCGAT GTGAATAATG ACGGTTTTGC CGATGTAGTC 
ACGCTCGACA TGTATCCCGA AGATGAAACA GTTGAGAAAT CGTCGCTGGG CGAAGATCCG 
CTGGATATTT ACACCTATAA ACTGGCGTAC GGCTACATGA ACCAGTACAG CCGGAACTGT 
CTGCAACTGA GTCTTTCGGG TAAAAAATTC ATGGACATCG GCGCGATGTC GGGGGTAGCC 
GCAACCGACT GGAGTTGGTC GCCGTTGCTG GCCGACTACG ACAACGATGG GATCAAAGAC 
CTGTTCATCA CGAACGGCAT TGTCCGGCGG CCTAATAACC TGGAGTACGT GAAGTTTGCC 
GCTGACGACT CATTGCGGTA TGCAATGGAA ACATCGAAAT CGCTCGATGA GCGGGCTACT 
AAACTCATGC CCGAAGGCAA AGTGCATAAT TACCTGTACC GGGGAACACC CTCGTTGCGG 
TTTGAGGATA AGTCGTCGGC CTGGGGTTTC GAACTGCCGA ATTACTCGAA CGGTTCCGCC 
TACGCCGACC TCGACAATGA CGGCGATCTG GATCTCATTA CCAACAACAT CAACGACCCG 
GCCAGTTTGT ACCGCAATGA AGCCACGACG TTGTTTCCCG AAAATACGCA CCTGACCGTT 
AAGCTCAAAG GCGATTCGCC CAACACATTT GGGGTAGGGG CAAAGGTGAT TTTGAAATAC 
GGCAAAGACA GTCTGCTGGT GCAGCAACTG ATGCCAACGC GGGGCTTCGA GTCGTCAGTG 
GCACCGGAGT TACTGTTTGG GTTGGGCAAG CGGGCCAGCA TTGACTCGCT GATCGTTATC 
TGGCCGAATC AGCAGATGGA GGTGCGTACC AACGTCAAAA CCAATCAGTC GATAATGCTG 
AAACAGGCGG ATGCCAAACT CGATGGTGCC GGGTTCGTTT ATACAAATCC GCCCATGCAG 
CCTTTGTTCG CCGATGTATC GACCGCCGAC TCAATTCCGT ACCAACACAA GGAAAATAAA 
GAGTATTTCG ATTTCGTGCG GGAGTCGCTG ATGCCGTTCA AAGTGTCGAC CGAGGGGCCG 
CATCTGGCCG TTGGGGATGT AAACGGCGAT GGACTGGACG ATATGTATGC CGGTGGGGCC 
AAGTGGCAGG CTGGTAGCTT ACTCGTGCAG CAAGCGAACG GAACGTTCAA ACCATCGGTA 
CAGGCCGACT TTAAGAAAGA CTCTGTTTAT GAAGACGTCG ACGCGGTTTT CTTCGATGCC 
GATGGCGACA AGGACCTGGA TTTATACGTC GTTTCGGGCG GTAACGAGTT TTATAACAAG 
ATGCCGGAGC AGTTCGACCG GCTCTACCTG AACGACGGCA AAGGAAGCTT TACGCGTTCG 
CCGAATGCGC TGCCTGCCAT GTACGATAAC AAAAGCTGCG TTCGTCCTTT CGACGTCGAT 
AACGACGGCG ACCTCGACTT GTTTGTGGGT GGGCGTGTAG TGGGCTTCGG CTACGGTAAA 
TCGCCTAATT CGTATTTGCT GGTCAACAAT GGCAAGGGTA CGTTTACAGA TCAGATTGAT 
AAGCTGGCAC CGGGCCTCCG AACGGTTGGT ATGGTTACCG ACGCCGTATG GGCCGATTAT 
GACGGTGATA AAGACCAGGA CCTGATCGTG TCGGGCGACT GGATGCCGAT TCGCATTTTC 
GCCAATGATA AAGGGAAATT CCAGGAAGTG AAATCCATTA CCGATACCCC GCTCAACGGC 
TTTTTTCAGC GCCTTATTGC CGCCGATTTC GACCGGGATG GTGATATTGA TCTGGTAGCT 
GGAAACATCG GCACAAACAC CAAGTTCCGC AAAACACCCG ATTCGCAGCT GCGGATGCTG 
GTAAAGGATG TAGACAATAA CCAGAGTATT GAGCAGATCA TTTCGTACAA TCGCGGAGAT 
GACTGGTACC CACTCGCCTT TAAAGACGAA CTGGGCAAGC AAATGCCGAG CATCATTAAC 
AAACGCTTTA CCGACTATGT CTCCTTCGCA GGGAAGCCGC TCGATGATGT TTTGACGGAT 
GAAGAACTGA AAGGAGCGGA TGAACTTACC GTTATCGAGT TTGCTTCGGT TTACCTGGAG 
AATAACGACG GTAAGTTTGT CGTGCATGAA CTGCCCATGA TGGCGCAGGT ATCGAAGTTA 
TTTGCCCTGC AGGCCATTGA CTTCGACCGG GATGGGGATC TGGATATACT GGGGGGAGGT 
AACTTTTACG GGGTCAGCAC CTATCAGGGT CGATACGATG CCAGTTACGG GCTGGTACTG 
CGGAATGATG GCAAAGGAAA CTTTAGTGCG CTGTCGCCCG TAGATTCCGG TTTCCTGCTC 
AATGGCGAGA TACGGGATAT TCGCCCCGTA CGTTCGGCTC AGGGCGTTCG CATCGTTGTA 
ACGCGGAACG ACGCTGGTAT GCAGGTATTC AAATCGCTGT AG 

 

Protein sequence

MNRILLFIGA LALTGCNSFK SEKPLFESLD STQTGVGFVN KLVPTEKLNI LDYLYFYNGG 
GVSAGDINND GLTDLYFVSN QGKNKLYLNK GDFKFEDITA KAGVEGFADW QTGSTMADVN 
GDGLLDIYVC AVGNFRGQEG SNELYINNGD NTFTEKAADY GLDFTGFSTQ AAFFDYDHDG 
DLDCYLLNHA IHTSRSYDRV SARNLRNNES GDYLYENQSI TKSGQAPAGK IARFQNVSER 
AGIFGAAMGY GLGVSVADLN NDGWEDIYVS NDFHEDDYYY VNNHDGTFTE SVKKAFQHTS 
RFSMGNDIGD VNNDGFADVV TLDMYPEDET VEKSSLGEDP LDIYTYKLAY GYMNQYSRNC 
LQLSLSGKKF MDIGAMSGVA ATDWSWSPLL ADYDNDGIKD LFITNGIVRR PNNLEYVKFA 
ADDSLRYAME TSKSLDERAT KLMPEGKVHN YLYRGTPSLR FEDKSSAWGF ELPNYSNGSA 
YADLDNDGDL DLITNNINDP ASLYRNEATT LFPENTHLTV KLKGDSPNTF GVGAKVILKY 
GKDSLLVQQL MPTRGFESSV APELLFGLGK RASIDSLIVI WPNQQMEVRT NVKTNQSIML 
KQADAKLDGA GFVYTNPPMQ PLFADVSTAD SIPYQHKENK EYFDFVRESL MPFKVSTEGP 
HLAVGDVNGD GLDDMYAGGA KWQAGSLLVQ QANGTFKPSV QADFKKDSVY EDVDAVFFDA 
DGDKDLDLYV VSGGNEFYNK MPEQFDRLYL NDGKGSFTRS PNALPAMYDN KSCVRPFDVD 
NDGDLDLFVG GRVVGFGYGK SPNSYLLVNN GKGTFTDQID KLAPGLRTVG MVTDAVWADY 
DGDKDQDLIV SGDWMPIRIF ANDKGKFQEV KSITDTPLNG FFQRLIAADF DRDGDIDLVA 
GNIGTNTKFR KTPDSQLRML VKDVDNNQSI EQIISYNRGD DWYPLAFKDE LGKQMPSIIN 
KRFTDYVSFA GKPLDDVLTD EELKGADELT VIEFASVYLE NNDGKFVVHE LPMMAQVSKL 
FALQAIDFDR DGDLDILGGG NFYGVSTYQG RYDASYGLVL RNDGKGNFSA LSPVDSGFLL 
NGEIRDIRPV RSAQGVRIVV TRNDAGMQVF KSL