| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5052 |
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| Symbol | |
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| ID | 8728817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6155369 |
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| End bp | 6157132 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | glycoside hydrolase family 9 |
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| Protein accession | YP_003389826 |
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| Protein GI | 284039896 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.886971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTTT CTGTAATCAT ACTTCTCTTG TTGGCCACCA GATTGGTCAA TGGACAATCT
CTGTCCACAA CTATTAGGCT CAATCAGGTT GGGTTTTACC CTAATGCCGC AAAAGTGGCC
GTGATTGTAC ATGATGCAGG CGCATCTGCC GCGTCCGGTA AGTTTCAGCT TATGACTCCC
GACCAGAAAA AGGTTGTCTT TACGGGTACG TTGAGTGGCC CTAAACAGAA CCAGATTTCG
GGTAAGACAA GCCAATTCGC TGACTTTTCG GCTTTTAAAC AGAAGGGGAC TTATGTTGTA
GCCGTACCCG GTTTGGGCCA CTCGTACCCG GTCGAGATTC GGCCGGATGT TCACCGGGCC
GCAGCCATTG GTGCTCTGAA AGGATTTTAT TATCAGCGTA CGTCTACCGA CTTACCCGCC
AGGTATGCCG GTAAATGGGC CCGTCCGGCC GGGCATCCGG ACACTCGGGT CTTGATTCAC
CCATCGGCCG TTTCGCCAGG GCGCTCGGCG GGTACGGTTA TTTCGTCGCC CAGGGGGTGG
TACGATGCGG GCGATTACAA TAAGTACATC GTCAATTCGG GCATTACGGT GGGCACGCTG
CTTTCTCTGT ACGAAGACTT CCCTGCCTAT GCCAAATCGT TCGATACCAA CATTCCCGAA
ACAGGCAATG CTGTTCCCGA TCTGCTGGAC GAAGTGCTCT GGAACCTCCG CTGGATGCTG
ACCATGCAGG ACCCGGCTGA TGGGGGCGTT TACCATAAAT TGACGAATCC AAGCTTCGAT
GGGATGGTTA TGCCCGATAA AGCCACAAAA GATCGGTATG TGATTCAGAA AAGCATTACC
GCAACCCTCG ATTTTGCCGC TGTACTGGCC CAGGCCAGCC GGGTATTCAA ACAGTACAAC
AAAGCATTGC CCGGCCTATC GGACTCCTGC CGCACGGCGG CTGTGAAAGC CTGGAAATGG
GCTGAGCAAA ACCCCAACGC CGTCTATCGT CAGAACGAAA TGAATACGCA GTTCGACCCC
GACGTGGTAA CGGGGAGTTA CGAAGACCGC GATGCTAGCG ACGAGTGGGT TTGGGCTGCG
CTTGAACTGT ATGTGACGAC AAAAGACGAC GCCTATTATA CGGCTGCAAA ACTAAAATCG
GATGAGAAGC TAAGCTTACC CTCCTGGAAT CAGGTTCGCC TGTTGGGGTA TTATACACTA
GCCCGCTTTG CGAATGAGCT TACACCCCTT GGTAAACAGG GAAGCGAGTC GGTGAAGAAA
CAACTGCTTG CCTTTGCCGA TGACCTTATT CAGGGAACAG ACCAGCAGGC GTATGGTACG
GTGATGGGCA AATCGGCGCG GGATTACATT TGGGGGAGTA GCTCCGTTGC CGCTAACCAG
GGTATTGCGC TGATTCAGGC GTACAACCTC ACCAAAGATA ACCGCTACCT GCGGTTTGCC
TTAACCAATC TCGACTATCT GCTGGGCCGC AATGCAACGG GCTACTCGTT GTTGACGGGA
TTTGGCGCCA AACCGATTAT GAATCCGCAC CATCGGCCAT CCGTAGCCGA CGGAATCACC
GAACCAGTAC CAGGCCTACT ATCGGGCGGG CCGAATGGCA ATGCACCGAA GCAGGACAAA
TGCCCCGGAT ACACCGCCAC TTCGGCCGAC GAAATGCTTC TGGATGATTC CTGTTCGTAT
GCCTCCAACG AAATTGCCAT TAACTGGAAT GCCCCGTTGG TTTATCTGGC GACAGCTATC
GAGGCATTGC AAACAAAGCT TTAG
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| Protein sequence | MRVSVIILLL LATRLVNGQS LSTTIRLNQV GFYPNAAKVA VIVHDAGASA ASGKFQLMTP
DQKKVVFTGT LSGPKQNQIS GKTSQFADFS AFKQKGTYVV AVPGLGHSYP VEIRPDVHRA
AAIGALKGFY YQRTSTDLPA RYAGKWARPA GHPDTRVLIH PSAVSPGRSA GTVISSPRGW
YDAGDYNKYI VNSGITVGTL LSLYEDFPAY AKSFDTNIPE TGNAVPDLLD EVLWNLRWML
TMQDPADGGV YHKLTNPSFD GMVMPDKATK DRYVIQKSIT ATLDFAAVLA QASRVFKQYN
KALPGLSDSC RTAAVKAWKW AEQNPNAVYR QNEMNTQFDP DVVTGSYEDR DASDEWVWAA
LELYVTTKDD AYYTAAKLKS DEKLSLPSWN QVRLLGYYTL ARFANELTPL GKQGSESVKK
QLLAFADDLI QGTDQQAYGT VMGKSARDYI WGSSSVAANQ GIALIQAYNL TKDNRYLRFA
LTNLDYLLGR NATGYSLLTG FGAKPIMNPH HRPSVADGIT EPVPGLLSGG PNGNAPKQDK
CPGYTATSAD EMLLDDSCSY ASNEIAINWN APLVYLATAI EALQTKL
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