| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5050 |
|---|
| Symbol | |
|---|
| ID | 8728815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6153732 |
|---|
| End bp | 6154904 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | glutathionylspermidine synthase |
|---|
| Protein accession | YP_003389824 |
|---|
| Protein GI | 284039894 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.440506 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCCC TTAAACCACT ACCTATATCC CCCACTACCC AGCTACAAAA CCTTGGCTGG
GACTGGATGC TCGGCCAGGA TACACTGCCT TACCTTGCCA ATGAGGTTGT AACAATAAAG
TCTGCCGAAG CGGATGCCTA CTATGAAGCG GCCAATGAAT TATTCGAGAT GTTTATAGCC
GCCGGACAGC AGATCATCGA CGAAAACCGA TTTGCGGAAG CAGGCATTCC AGCCAACCTG
ATTGAGCTGA TAAAGCTGTC CTGGAACGAC GACCGTCATA TTCACCTCTA TGGTCGCTTC
GATCTGGCCG GGGGCATCGA TGGGCAACCC ATCAAGCTAA TCGAGTTCAA CGCCGATACC
GCCACCTGTT TGCCCGAAAC AGCCGTTGTT CAGTATGCAC ACCTGCGCGC CAACGGCCTC
GACGACAGCC AGCAGTTCAA CACGCTCTTT GAAACCTTAA CGGGCCAGTT TGAAGAACTT
CTGGCCGTAA ACCCCGACTT ACAGCCAACG CTGCTACTCT CGGCCATGCG GGGCTTTCCC
GAAGACGATG CCAACGTAGC CTTACTGGGC GAAGCAGCCC GGGAAGCCGG TTATGATATT
GAATTCGATT TTATCGATAA TGTGGATTTC TCAGCAGAAG AGGGCATTTT CTGGCAAAAC
CCTAAAAATG GTCAGTTCGA AAAGCTGGAC TTCTGGTTTA AGCTAGTGCC CTGGGAATCC
ATCGCCGAAG ATGAGCCCGA ACTGGTTCAA ATCCTGACCG AGATTGTTCG CAAGCGACTG
GCCGTTGTGC TGAATCCAGC GTATACCCTG CTGTTTCAGT CGAAATACAT TCTGAAAGTT
CTGTGGGAGC TATATCCGAA TCACCCCCTG CTGCTCGAAA CCGATACGAA GCCACTGGTA
GGAAAACCCT GCGTTGAAAA AGTACTGTTT GGGCGGGAAG GTGCCAATAC CCGTATTTTA
AACCCGGACG GCAGCGAGCG GCAGATTACC GAGGGCGACT ATGGCGATTA CCCTAAAATT
TATCAGGAGT ACGTCGATTT CCCGAAGGAC TCGGCGGGCA GCTCGTATCA GGCTGGTGTT
TTTTATGCCG GAGAGGGCTG CGGGCTAGGT TTCCGTCGTG GTGGGCTCAT TCTAGACAAC
ACGGCCGGTT TTGTGGGGCA TGTTGTTGAG TAA
|
|---|
| Protein sequence | MISLKPLPIS PTTQLQNLGW DWMLGQDTLP YLANEVVTIK SAEADAYYEA ANELFEMFIA
AGQQIIDENR FAEAGIPANL IELIKLSWND DRHIHLYGRF DLAGGIDGQP IKLIEFNADT
ATCLPETAVV QYAHLRANGL DDSQQFNTLF ETLTGQFEEL LAVNPDLQPT LLLSAMRGFP
EDDANVALLG EAAREAGYDI EFDFIDNVDF SAEEGIFWQN PKNGQFEKLD FWFKLVPWES
IAEDEPELVQ ILTEIVRKRL AVVLNPAYTL LFQSKYILKV LWELYPNHPL LLETDTKPLV
GKPCVEKVLF GREGANTRIL NPDGSERQIT EGDYGDYPKI YQEYVDFPKD SAGSSYQAGV
FYAGEGCGLG FRRGGLILDN TAGFVGHVVE
|
|---|
| |