Gene Slin_5044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5044 
Symbol 
ID8728809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6148067 
End bp6148840 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content42% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389818 
Protein GI284039888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.899608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAA CTGACTTATG GACTAGAGAG GAAACCATTT TGGCATTCAA TCTTTATTTC 
AAAATTCCAT ACGGCACCAT CCACGGCGGA AACCCTAAAG TGCGTGAGTT GGCTGAACTT
ATAGGTAGGT CTAAAGGGTC TGTTGGACGA AAAATGCAAA ATCTCGCGAG CTTTGACCCA
GTTCAACAGG CTCGGGGCAT CAAGGGGTTG TCGCACGCCA GTAAACTTGA CGTAGAAATC
TTTAACGAGT TTGTCAGCAA TTGGGCTGAA CTCGCCTATG AAAGCGAAAA AATTCTGGCT
GAAAAGCATC ACATCCCCCT TGAAGAGAAA GTAGAAATTG ACGAATACGA GTGGCAAAAT
AGAAGTGGTA AAGATGTGGT TCGTTCCGTC AAAACGAGAG TCGGTCAAAA CTTCTTTAGG
AGTACCGTCC TGAATAATTT TGACTCAAAA TGTGCAATTT CTGGGATCAA TATCCCCGAG
ATGCTCAGGG CAAGTCACAT TGTTCCCTGG TCGAAAGATG AACGGGCACG TGTAAATCCT
GAAAATGGTT TATGCCTTTC TTCCTTATAT GATGACGCTT TTGACAGAGG TTTTATTGGG
GTAAGTACTG ACTATAAAGT TATTCTGGCT GAAAAGTTAA AAAGACGTAG TAAAGAGCCA
TATTTTCAGG AACATTTTGG CAAGATTGAC AACATCGCCA TCAGGCAGCC AAGCAAATTT
TTTCCGCGCA AAGAGTTTCT GGAATATCAT TTAGATCAGA TTTTCGATAA ATGA
 
Protein sequence
MARTDLWTRE ETILAFNLYF KIPYGTIHGG NPKVRELAEL IGRSKGSVGR KMQNLASFDP 
VQQARGIKGL SHASKLDVEI FNEFVSNWAE LAYESEKILA EKHHIPLEEK VEIDEYEWQN
RSGKDVVRSV KTRVGQNFFR STVLNNFDSK CAISGINIPE MLRASHIVPW SKDERARVNP
ENGLCLSSLY DDAFDRGFIG VSTDYKVILA EKLKRRSKEP YFQEHFGKID NIAIRQPSKF
FPRKEFLEYH LDQIFDK