Gene Slin_5029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5029 
Symbol 
ID8728794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6132999 
End bp6134576 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content54% 
IMG OID 
Productphosphoglycerate mutase, 2,3-bisphosphoglycerate- independent 
Protein accessionYP_003389805 
Protein GI284039875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAA AAGTAATTCT CATCATTCTT GACGGCTGGG GTATTCCGCT AAAGCCCGAA 
GTGTCGGCTA TCGAAGCAGC CAATACACCC TTCATGAATT CACTCTACCC CAAATACCCC
CATAGTACAC TGGAGGCTTC CGGGCTGGCC GTTGGGCTTC CGGCCGGCCA AATGGGTAAT
TCCGAAGTAG GGCACATGAA TCTAGGTGCG GGCCGGGTCG TTTATCAGGA TTTGGTAAAA
GTTAATAAGG CCGTTGACGA GCACACGCTC GACAACGAGC CAGTACTGGT CAATGCGCTG
AATTACGCGA AAACAAACGG TAAAAAAGTA CATTTCATCG GTCTTGTGTC TGACGGGGGT
GTTCACGCCC ACATCGAGCA CGTAAAGGGG CTGCTTTCCA TTGCGCAAGC CCACGGCCTG
ACCGACGTAT TCGTGCATGC CTTTACGGAC GGTCGCGATA CCGACCCGAA AGGCGGCATT
GGTTACCTGA CCGATTTACA GGCCCATATG GCCGTATCGA CGGGCCAGAT TGCTACGGTG
ATTGGCCGTT ACTATGCTAT GGACCGCGAC AACCGCTGGG AGCGGGTTAA GGTTGCCTAC
GATGCCATGG TGAAAGGTGA AGGCACCAAA GTAGCTGGGG CCGACATTGC CGCGTCGTTA
CAGGCATCGT ACGATGCGGG TGTGACCGAC GAGTTCATTA AGCCGCTTAT TGTTGCCAAT
GTCGATGGTT CGCCGGTGGC GGTGATTGAA GATGGCGACG TGGTGCTGTG CTTTAACTTC
CGCACTGACC GGGGTCGTGA AATCACCCAG GCGCTGACCC AGAAGGATTT TCCGGAGCAG
GACATGAAAA AACTGTCGCT GGAATACATC ACGATGACGA ACTACGACAG CGAGTTTGAG
AACGTAAAAG TCATTTTCGA TAAAGATAAC CTGCAAAACA CACTCGGTGA GGTCGTTGCC
GGAGCTGGTC GGAAGCAGAT TCGCATTGCC GAGACCGAGA AGTATCCCCA CGTTACGTTC
TTCTTCTCGG GTGGTCGTGA AGAGCCATTC GCCGGAGAGA AGCGCCTGCT GTGTCCATCG
CCGAAAGAGA TGGTCGTGCG CGACGCAAAC GGCGTAGAAA CAACGATTCC CGTTAAGACC
TACGATCAAA AGCCGGAAAT GGCCGCTTAC GACATTCGCG ACGCTATTAT TCCGGAGCTG
GAAAGTGAAG AGCCGGATTT CATCTGCCTG AACTTTGCCA ATACCGACAT GGTAGGGCAC
ACGGGCGTAT TTGAAGCCGT AAAAATTGCC GCCGAAACAG CCGATGCCTG CGCCCAGGCC
GTAACCGAAG CTGCGCTGGC GCATGGCTAC ACGACGATCA TCATTGCCGA CCACGGTAAC
GCTGAGTTTA TGACAAACGA CGACGGTACA CCAAACACAG CTCACACAAC GAACCTGGTG
CCATGTATCC TGATTGATAA AGATTACCAT CCGTCGCTGA AAGACGGCAA GCTGGCTGAC
ATCGCCCCAA CGATTCTTGA ATTGATGGGC ATCCCGCAAC CTGCCGAAAT GGGTGGCGTG
AGCCTGATTG TGAACTAG
 
Protein sequence
MDKKVILIIL DGWGIPLKPE VSAIEAANTP FMNSLYPKYP HSTLEASGLA VGLPAGQMGN 
SEVGHMNLGA GRVVYQDLVK VNKAVDEHTL DNEPVLVNAL NYAKTNGKKV HFIGLVSDGG
VHAHIEHVKG LLSIAQAHGL TDVFVHAFTD GRDTDPKGGI GYLTDLQAHM AVSTGQIATV
IGRYYAMDRD NRWERVKVAY DAMVKGEGTK VAGADIAASL QASYDAGVTD EFIKPLIVAN
VDGSPVAVIE DGDVVLCFNF RTDRGREITQ ALTQKDFPEQ DMKKLSLEYI TMTNYDSEFE
NVKVIFDKDN LQNTLGEVVA GAGRKQIRIA ETEKYPHVTF FFSGGREEPF AGEKRLLCPS
PKEMVVRDAN GVETTIPVKT YDQKPEMAAY DIRDAIIPEL ESEEPDFICL NFANTDMVGH
TGVFEAVKIA AETADACAQA VTEAALAHGY TTIIIADHGN AEFMTNDDGT PNTAHTTNLV
PCILIDKDYH PSLKDGKLAD IAPTILELMG IPQPAEMGGV SLIVN