Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5026 |
Symbol | |
ID | 8728791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6126394 |
End bp | 6128022 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | sulphate transporter |
Protein accession | YP_003389802 |
Protein GI | 284039872 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0023678 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACAC AAGTTAAACC TATTATTCAC GTCGTTCCGG CGAAAGGTCT TGCCGGGTTG AAAGAAAATT GGCAGTCCGA TTTATTATCC GGATTCCTGG TTTCGCTGAT TGCCTTGCCA CTCAGCCTTG GTATCGCATC AGCCAGTAAT TTTCCGCCAA TCATGGGCGT GCTGACAGCC ATTGTTGGCG GGTTGATCGT TGCGTTGTTT GCGGGTTCGG AACCAACCAT TAAAGGGCCG GCGGCCGGGT TGATCGTAAT TGTTGCCGGT TGCGTAGAAG AATTAGGAAA GGGAGACCTC GAACTAGGCT GGAAACTGAC CCTGGGGGTT ATCATAGCGG CCGGTGTCCT GCAAGTGGTT ATGGGCATAC TGAAAGTGGC CAAACTAGCC GACTTTTTTC CGCTGTCGGC CGTCCATGGT ATGCTGGCAG CCATCGGGAT CATCATCATG TCGAAGCAGA TTCACCTGGC CGTTGGTATC GCCCCATCCG AACTAAAGGG AAAAGAGCCG CTCGAACTGC TGGCAATGGT GCCCCACAGT CTCAGCCATA TGGAGTGGCA CGTAGCAGTG ATCGGGCTCG TTAGCCTGGT TATTCTGTTT AGCTGGCCTA ACATCAAAAG CAAAGCGATC AAGCAAATCC CTCCCGCACT GGTTGTTCTG GTCGTAGCCA TTGCCCTGGG ATTATACTTC AACCTGTCTG ATACAAAACT ATACAGCGCC ATTAAACCAC TGGTCAATCC CGGCGAGTTT AAGCTGTCGT ACAATGCAAA CTTTGGAGCC TGGTCGGGCG ACATGCTGCC CGTCGCCCTG AAATACCTCG CCATGTTCAC TATTATTGGC TCGCTGGAGT CGCTGCTGAC GGGTAAGGCA ATCGACCTGC TTGACCCCTA CAAGCGTAAA TCGAATTTAA GCAAGGATTT AACAGCGGTT GGTATCGGCA ACATGGTGTC GGCAGCACTG GGTGGCCTAC CTATGATTTC GGAAGTAGCC CGTTCGTCGG CTAACCTGAC CAATGGGGGC AAAACTCGCT GGGCAAACTT CTTTCACGGC GGATTCCTGC TGCTTTTTGT AGTGGCTCTT GTTCCGCTCA TCAAACTTGT TCCGGTAGCG GCACTGGCGG CCATCCTGAT TGCCGTTGGG TTCCGGTTGG CTGCTCCCAA AGAGTTTCGC CATATGCACC ACATAGGAGC TGAGCAGTTG ATCGTATTTG TGATTACAAT TATAGCTACG CTGGCTACCG ACTTGCTGGT AGGCATTGCG GTGGGTATTG CCGCCAAGTT TGTTATCCAG CTGGCACTCG GCCTGCCTAT AAAATACCTT TTCAACCCCC AGCAGGAGCT TATCTCCGAA GGATCGCACC ATACACTTAC CATCACCGGA GCCGCTGTGT TTACCAATTA CCTGTCGATC AAAAAGCAAC TGGACACTAT CCCACAGGAG GCAGGTCAGC ACGTCACAGT CGACTTACAC CAGGCCCGGT TCGTAGACCA TACCGTTATG GAAAATCTGC ACAATTACGA GCGTGATTTT CAACTGGCCG GTGGCGAATT CCACGTCATT AACCTCGATG GGCACCAACC CATGTCGACG CATCCGCTGG CGGCCCGTCG AAAAAAAATG GCCATTTAA
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Protein sequence | METQVKPIIH VVPAKGLAGL KENWQSDLLS GFLVSLIALP LSLGIASASN FPPIMGVLTA IVGGLIVALF AGSEPTIKGP AAGLIVIVAG CVEELGKGDL ELGWKLTLGV IIAAGVLQVV MGILKVAKLA DFFPLSAVHG MLAAIGIIIM SKQIHLAVGI APSELKGKEP LELLAMVPHS LSHMEWHVAV IGLVSLVILF SWPNIKSKAI KQIPPALVVL VVAIALGLYF NLSDTKLYSA IKPLVNPGEF KLSYNANFGA WSGDMLPVAL KYLAMFTIIG SLESLLTGKA IDLLDPYKRK SNLSKDLTAV GIGNMVSAAL GGLPMISEVA RSSANLTNGG KTRWANFFHG GFLLLFVVAL VPLIKLVPVA ALAAILIAVG FRLAAPKEFR HMHHIGAEQL IVFVITIIAT LATDLLVGIA VGIAAKFVIQ LALGLPIKYL FNPQQELISE GSHHTLTITG AAVFTNYLSI KKQLDTIPQE AGQHVTVDLH QARFVDHTVM ENLHNYERDF QLAGGEFHVI NLDGHQPMST HPLAARRKKM AI
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