Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5010 |
Symbol | |
ID | 8728774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6107514 |
End bp | 6109451 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
Protein accession | YP_003389786 |
Protein GI | 284039856 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGG AATCAAAAAT CCCCGCAGGC CCTTTAGCCG AGAAATGGGC CCGGCACAAG TTTTCGCTGA AGCTGGTCAA CCCGGCCAAC AAGCGTAAAT ACGAAATTAT TGTAGTGGGT ACAGGACTGG CTGGCGCATC GGCAGCTGCT TCACTGGCTG AACTGGGTTA CAACGTTAAG GCGTTCTGTT TCCAGGATAG CCCACGTCGG GCGCACTCGA TTGCCGCTCA GGGTGGTATC AACGCAGCCA AGAATTACCA GAACGACGGC GACAGTGTGT TCCGCCTGTT CTATGATACA ATTAAGGGTG GTGACTATCG GGCACGGGAA GCCAACGTGC ACCGGTTAGC CGAAGTTAGC GTCAATATTA TCGATCAGTG CGTAGCGCAG GGCGTTCCCT TCGCTCGTGA GTACGGCGGT ACGCTGGCCA ACCGTTCGTT CGGTGGTGCT CAGGTGTCGC GTACCTTCTA CGCACGGGGA CAGACAGGTC AGCAACTGCT GCTGGGTGCT TACTCGGCAC TGAGCCGTCA GGTAGCTAAC GGGAAAGTGA AACTGTACCC ACGTACCGAA ATGCTCGACC TCGTGGTTGA AGGCGGTAAG GCACGGGGTA TCATCACCCG GAACCTGATC ACCGGTAAAA TCGAATCACA TTCAGCACAC GCTGTGCTGC TTTGCACGGG TGGTTATGGC AACGTATTCT ACCTGTCGAC AAATGCGATG GGCAGCAACG TAACCGCAGC GTGGCGGGCA CACAAGAAAG GGGCTTTGTT CGGTAACCCT TGCTTTACTC AAATTCACCC AACCTGTATT CCAGTATCGG GCCACTACCA GTCGAAGCTG ACGCTGATGT CGGAGTCGCT GCGGAACGAT GGCCGGGTGT GGGCACCTAA GTCGAAGGAA GACGCAGTAC GGATTCAGAA AGGTGAAATA AAGCCAACGG ATCTGGCCGA AGACGCCCGC GATTACTTCC TGGAGCGCCG TTATCCAGCC TTCGGAAACC TGGTTCCCCG CGACGTAGCT TCGCGTAACG CGAAATACGT GTGCGATGAA GGCCGGGGCG TAAGTAAAAC CGGTCTGGCC GTTTATCTGG ATTTCGCCGA TGCGATCAAA CGCGACGGAC GGAAGACGAT CGAGGCTAAA TACGGTAACC TCTTCGAGAT GTACGAAAAG ATTACCGGCG AAAACCCGTA CGAACTGCCG ATGATGATTT ACCCCGCTGT TCACTACACG ATGGGCGGTT TGTGGGTCGA TTACAACCTG ATGACGACTA TTCCCGGCCT GTACGCACTC GGCGAGGCTA ATTTCTCCGA TCACGGTGCT AACCGCCTTG GTGCTTCGGC GCTGATGCAG GGGCTGGCCG ATGGTTATTT CGTAATTCCG TACACCGTTG GCGATTATCT AGCAACGATT GGCCCGGCCG ATAAAATCCC CGTCGATTCG CCAGCATTTA AGGAAGCCGA GCAGAAAGTA CATGCTCAGG TGAACCAACT GCTGTCTATC AAAGGCGAGC GTCCTGTCGA TGAACTTCAT AAGGAACTCG GTCACATCAT GTGGGAGTAT TGCGGTATGT CGCGTACGGC CGAAGGGCTG AAGCTAGCCA AGCAGAAAAT TCAGGCGTTG AAGAAAGAGT TCTGGACCAA TGTAAAAGTA CTGGGTGACT CGGAAGAGAT GAACCAGGCG CTGGAGCAGG CCGCTCGGGT TGCCGACTTT ATTGAACTGG GCGAGCTGAT GGTCGACGAT GCACTGAACC GCGAAGAGTC CTGCGGTGGT CACTTCCGCG AAGAACACCA GACACCCGAT GGCGAAGCCT TACGTGACGA TGAAAACTTC GCTTACGTAG CTGCCTGGGA ATATCAGGGT GAAGGTCAAC CCGAACTGCT TAATAAAGAG ATTCTCGAAT TCGAGAACGT TAAACTGACA CAGCGGAGTT ATAAATAA
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Protein sequence | MKLESKIPAG PLAEKWARHK FSLKLVNPAN KRKYEIIVVG TGLAGASAAA SLAELGYNVK AFCFQDSPRR AHSIAAQGGI NAAKNYQNDG DSVFRLFYDT IKGGDYRARE ANVHRLAEVS VNIIDQCVAQ GVPFAREYGG TLANRSFGGA QVSRTFYARG QTGQQLLLGA YSALSRQVAN GKVKLYPRTE MLDLVVEGGK ARGIITRNLI TGKIESHSAH AVLLCTGGYG NVFYLSTNAM GSNVTAAWRA HKKGALFGNP CFTQIHPTCI PVSGHYQSKL TLMSESLRND GRVWAPKSKE DAVRIQKGEI KPTDLAEDAR DYFLERRYPA FGNLVPRDVA SRNAKYVCDE GRGVSKTGLA VYLDFADAIK RDGRKTIEAK YGNLFEMYEK ITGENPYELP MMIYPAVHYT MGGLWVDYNL MTTIPGLYAL GEANFSDHGA NRLGASALMQ GLADGYFVIP YTVGDYLATI GPADKIPVDS PAFKEAEQKV HAQVNQLLSI KGERPVDELH KELGHIMWEY CGMSRTAEGL KLAKQKIQAL KKEFWTNVKV LGDSEEMNQA LEQAARVADF IELGELMVDD ALNREESCGG HFREEHQTPD GEALRDDENF AYVAAWEYQG EGQPELLNKE ILEFENVKLT QRSYK
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