Gene Slin_4981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4981 
Symbol 
ID8728745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6071325 
End bp6071906 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content53% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003389758 
Protein GI284039828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000475224 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGAGC AAGCGCTAAC CGATACCGAA TTAGTAGCCC TGCTTCGTGA TGATAGCGAG 
GAGGCATTTC GCACGTTGTA CGAACGACAC TGGTACGACT TGTTTACGCT GGCAAAGCGC
AAACTCCGCG ACGAAGCGAT GGCTTCCGAC ATGGCGCAGG AACTGTTTCT TCGGCTCTGG
CAAAAACGAA GAACGCTCCT CATCAACAAC GTTGGGGCGT ACCTGACGAC TTCCCTCAAA
CACCTCATAG TCGATCATGT GCGTACGCAG TTGCAGGGAG AGCAATACGC CAGTCACTTC
ATTCACACTC CGCCTACCGA TACGCTCAAC ACCCTCCACT CAGTCCAGTT CAGCCAATTA
ACCGAATCGC TCAATCAGGC ACTGGAGCAA CTGCCCGATA AAACCCGCGA GGTATTTGTT
CTCAACCGGT TCGAGCAACT AACCATCCGG GAAATCTCTG CAAGGCTTGG CCTTTCCGAA
AAAGCCATTG AATACCACCT GTCCCGTTCG GTCGCTTTCC TGCGCGCCAA CCTGCACGAC
TATGCCACGG CTGTTGTGCT GACCATCCTG TCGAGCTATT AA
 
Protein sequence
MSEQALTDTE LVALLRDDSE EAFRTLYERH WYDLFTLAKR KLRDEAMASD MAQELFLRLW 
QKRRTLLINN VGAYLTTSLK HLIVDHVRTQ LQGEQYASHF IHTPPTDTLN TLHSVQFSQL
TESLNQALEQ LPDKTREVFV LNRFEQLTIR EISARLGLSE KAIEYHLSRS VAFLRANLHD
YATAVVLTIL SSY