Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4977 |
Symbol | |
ID | 8728741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6063565 |
End bp | 6064755 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | metallophosphoesterase |
Protein accession | YP_003389754 |
Protein GI | 284039824 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.688138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000000713354 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGCAGG TTGGGGCGCT GGGTTTACTG CCCACGGTTC CGGCGCTGGC TGCCGTGTCC TCCGTTTCGG CAGAGGAAAA GAATCATTTT GTGGCAGGAC CGTATCTGCA AAATATGGGT ACTCAGGCCG TGACTGTTAT GTGGATTACC CACAAAAACT GCTTCAGCTG GGTCGAATAC GGTGCCGGAA CCTACACCAG CAAACGGGAA TTTGGCTATA GTAACGGACT GATCGAAGCC AACAACCGGA TCAATAAAAT AACCCTGTCG GGTCTGGCAC CCGGCGCTGA GCATAAGTAC CGGATCGTGT CTACCGAAAT ACTGGGCTAC AAAGGGTCGA AGGTGGAGTT TGGCGAAACG ATCACCAGCC CCATGTACGG TTTTAAAACC CCGGCCGAAA ACGAGCAAGA GTTTAAGCTG GTTATTTTCA ACGACATCCA CGACCGTCCG CAGATTATCC CCCAACTGCT GTACCGGCAC GGCTATACCG GCAATAAACG CGACTACGAT TTTGTCGTTT TCAACGGCGA TTGCTTCGAC TGGGTGACTG AAGAAAGCCA GATGGTCGAA CACCTGATTA AGCCATCGGT CGATATTTTT GCGTCGGAAA TGCCGTTCAT TCTGACGCAG GGCAATCATG AGTGCCGGGG CCGCTTCTCC CGCCACATAC CGGCCTATTT TGCCTACCCG GACGACAAAT ACTATTACGC TTTCACCCGT GGCCCGGTAC GGTTCGTCAT TCTGGATTCG GGAGAAGACA AGACCGACGA CAGCGTTGAA TACGGCGGAT TATCGGCTTT CGACCGCTAT CGGGAAACAC AGGCGAAGTG GCTGGAGAAA GAAATTGAGA GCATTGACTT CAAAAAAGCT CCTTTCCGGG TCGTGCTGAT TCATATCTCG CCTTACCACT CCGGCGACTG GCACGGCACT ATGCATTGCC GTCAGGTATT TGGGCCGTTG CTGAACAGGG CTAAAATCGA CCTTCAGGTT TCGGGCCACA CGCACCGGTA TGGTACCTAC AACGCCAATG CCGATCACAA TTACCCCATC GTGATCGGGG GCGGGCCGCT GGAAGGAAAC CGAACATTGA TAAAGCTGCA CGCTACGGCC AAAGAGCTGA ATCTGAAGAT GATTCGGGAT GATGGTGAAG TGGTGGGGAA GTACACCATT TCTAAAAAGA ACCGTACGTA A
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Protein sequence | MAQVGALGLL PTVPALAAVS SVSAEEKNHF VAGPYLQNMG TQAVTVMWIT HKNCFSWVEY GAGTYTSKRE FGYSNGLIEA NNRINKITLS GLAPGAEHKY RIVSTEILGY KGSKVEFGET ITSPMYGFKT PAENEQEFKL VIFNDIHDRP QIIPQLLYRH GYTGNKRDYD FVVFNGDCFD WVTEESQMVE HLIKPSVDIF ASEMPFILTQ GNHECRGRFS RHIPAYFAYP DDKYYYAFTR GPVRFVILDS GEDKTDDSVE YGGLSAFDRY RETQAKWLEK EIESIDFKKA PFRVVLIHIS PYHSGDWHGT MHCRQVFGPL LNRAKIDLQV SGHTHRYGTY NANADHNYPI VIGGGPLEGN RTLIKLHATA KELNLKMIRD DGEVVGKYTI SKKNRT
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