| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4976 |
|---|
| Symbol | |
|---|
| ID | 8728740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6062668 |
|---|
| End bp | 6063468 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_003389753 |
|---|
| Protein GI | 284039823 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000000483065 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCG TCCATAATCT GGTGTTCCTG CTGATTTCGC TCGTTTCCTA TGCCCACGAA
GGCCCATCGG ATGTAGCGAA GAAAGCAAAA AGTCTCAAAG TGATGACGTA CAACATTCAT
CACTGCAATC CACCGTCGGC CGGAAGCAAG ATTGATGTAG AGGCCATTGC CCGCGTCATT
ACGGCCGAGA AACCTGATCT TGTCGCCTTG CAGGAGGTCG ACGTGAACAC CGAACGGTCG
GGGAAGGGGT TAAATCAGGC AAAGGAGCTG GCCCGGCTGA CGGGGATGAA CTTCTTCTTT
TCGAAGGCCA TTGACCACCA GGGGGGCGAT TATGGCGTTG CGGTTCTTTC CCGGTTTCCT
ATTCTCGACT CTACCCGATT TATCCTGCCC ATCGACCCCA CCATTGGGGG CGAAACCCGA
ACCATAGCCG CCATAACGGT AGAGCCAACC AAAGGAAAGC GCATGATCTT TGCCAGTACG
CACCTGGATT TGAAGGAACC GAACCGGCTT ACGCAGTCAG AATTAATCAT CCGGCACTTT
GGGGCAACTG ATTTGCCGGT CATTCTGGCG GGCGATTTCA ATGCCCAAAC CGACAGCAAG
GTTATCCAGC TCTTTGACCA GACATTCGTG CGAAGCTGTC AATCCTGCGC GCCCACCATT
CCGGTCAAAA ACCCCAACCG CGCCATTGAT TTTGTGATGG TCAAACAGGG TGGCTCGCTA
AAAAGTACGT CGACAAGAGT CGTTGATGAG CAATATGCAT CCGACCATCT GCCCGTAGTC
GTCGAACTAA AGCTGAACTG A
|
|---|
| Protein sequence | MKFVHNLVFL LISLVSYAHE GPSDVAKKAK SLKVMTYNIH HCNPPSAGSK IDVEAIARVI
TAEKPDLVAL QEVDVNTERS GKGLNQAKEL ARLTGMNFFF SKAIDHQGGD YGVAVLSRFP
ILDSTRFILP IDPTIGGETR TIAAITVEPT KGKRMIFAST HLDLKEPNRL TQSELIIRHF
GATDLPVILA GDFNAQTDSK VIQLFDQTFV RSCQSCAPTI PVKNPNRAID FVMVKQGGSL
KSTSTRVVDE QYASDHLPVV VELKLN
|
|---|
| |