| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4963 |
|---|
| Symbol | |
|---|
| ID | 8728727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6048763 |
|---|
| End bp | 6049752 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | ATPase associated with various cellular activities AAA_3 |
|---|
| Protein accession | YP_003389740 |
|---|
| Protein GI | 284039810 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000000842987 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCT TTCAAACGCG TATCGATCTT AGTTCCCTGA CTGCCTCCAT CGACGCCATC
CGCGCCGAAG TCGGTAAGGT TATTGTTGGC CAGCATCAGA CCATTGACCT GCTCCTGACG
GCCCTGCTCG CCGATGGCCA CGTACTCATT GAGGGCGTAC CGGGCGTTGC CAAAACGCTA
ACGGCGAAAC TACTGGCGAA AACTATGTCG GTGGGCTTCA GCCGCATTCA GTTCACGCCC
GACCTGATGC CGTCCGATGT ACTGGGCAAC TCGGTCTTTG TCCCTAAAAC CGGCGACTTT
ATGTTTCGGC AGGGACCGAT TTTTTCTAAT CTGGTGCTGA TTGACGAAAT CAACCGGGCT
CCCGCCAAAA CGCAGGCTGC CCTTTTTGAG GTCATGGAAG AACGGCAGGT GACCAACGAC
GGCACAACTT ACCCGCTCGA TGAACCGTTT ATGGTGCTGG CCACCCAAAA CCCCATTGAG
CAGGAAGGTA CGTACCGGCT GCCCGAAGCA CAACTCGACC GATTCCTGTT CAAAATCGTT
GTCGGCTATC CGGTCGGCAA CGAAGAAACA GACATTTTGC GGGGGCATCA CCAGCGGCAA
AGCGCTGGTC GGCGCAACCT GAACGAGGCA CTGGACGCCG TTCAGCCGGT ACTGACGGCC
GAGCAGTTGG CAACCTTGCG CGGACAGGTG CATCAGGTAC ATGTGGAAGA TAAACTGTTC
GATTATATCG CGCAGATCGT GCAGTCGACC CGAACGAACA AGTCGCTTTA TCTGGGGGCG
TCGCCCCGCG CATCGGTCGC CTTGCTCAAC AGCGCTAAGG CCTTGGCTAC GTTACGGGGA
CGCGATTTTA TCACGCCCGA AGACGTTCAG GAACTGGCTC CATCGGTGCT ACGCCACCGT
GTACTGCTCA CCCCCGAACG CGAAATGGAA GGTGGCACCG CTGATGAAGT CATCACCCAA
CTCGTCCAGA AAATTGAAGT ACCCCGATGA
|
|---|
| Protein sequence | MESFQTRIDL SSLTASIDAI RAEVGKVIVG QHQTIDLLLT ALLADGHVLI EGVPGVAKTL
TAKLLAKTMS VGFSRIQFTP DLMPSDVLGN SVFVPKTGDF MFRQGPIFSN LVLIDEINRA
PAKTQAALFE VMEERQVTND GTTYPLDEPF MVLATQNPIE QEGTYRLPEA QLDRFLFKIV
VGYPVGNEET DILRGHHQRQ SAGRRNLNEA LDAVQPVLTA EQLATLRGQV HQVHVEDKLF
DYIAQIVQST RTNKSLYLGA SPRASVALLN SAKALATLRG RDFITPEDVQ ELAPSVLRHR
VLLTPEREME GGTADEVITQ LVQKIEVPR
|
|---|
| |