Gene Slin_4958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4958 
Symbol 
ID8728722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6043823 
End bp6044518 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID 
ProductRDD domain containing protein 
Protein accessionYP_003389735 
Protein GI284039805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000303152 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGTTG CCATCCGCAC CTCCCAAAAC GTTTTACTGG AATACGAACC CGCCAGTATT 
GGCGAGCGAA TTCTGGCCGC CATGCTCGAT TATCTGGTTA TTTTTGGCTG GGTTTTGCTG
GTCTTTGGCA TACCCGCCCG GTTGAAGATA ACGCCGGGTA CGTTTTACTC GATTCTGGTG
CTGTCGCCCG TTTTATTTTA CGATTTGCTA TCCGAATGGA TGCTGAACGG ACGTAGTGTT
GGCAAGATTG CGCTGGGTAT CCGGGTGGTC ATGCTGGATG GGTCGCAGCC GGGCCTGGGC
GCTTATCTGA TTCGATGGGT GCTGCGCATT GTTGAATCCG TAGGCTTTCT CGGTGGCATT
GTGCCCATCA TTACGGTAGC CGCCAACGGG AAAGGCCAGC GGCTGGGCGA CATTGCCGCC
GGCACAACCG TTGTTAAATT AAAACCCGCC GTTTCGCTGG ACGACGTACT ATTTCAACCT
TTACCCGAAA CCTACGTGGT TCAGTTTCCT GATGTGCGGT TATTGTCCGA CCGGGATATG
GGCATTGTTC GCCATATCCT TCGACAGGGT GATGAACTGG CCGTTCAACG GACGGCCGAT
AAAATTAAAG AGGTGACCGG TATCCAGAGC GATTTGCCAA ATTGGACCTT TCTGGAAACG
GTTGTCAGCG ATTATCAGTT TATAACAGCA CAGTGA
 
Protein sequence
MSVAIRTSQN VLLEYEPASI GERILAAMLD YLVIFGWVLL VFGIPARLKI TPGTFYSILV 
LSPVLFYDLL SEWMLNGRSV GKIALGIRVV MLDGSQPGLG AYLIRWVLRI VESVGFLGGI
VPIITVAANG KGQRLGDIAA GTTVVKLKPA VSLDDVLFQP LPETYVVQFP DVRLLSDRDM
GIVRHILRQG DELAVQRTAD KIKEVTGIQS DLPNWTFLET VVSDYQFITA Q