Gene Slin_4957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4957 
Symbol 
ID8728721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6042566 
End bp6043753 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content57% 
IMG OID 
Productamidohydrolase 
Protein accessionYP_003389734 
Protein GI284039804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00657786 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGATT CAATCAAATC CCTTGCCCGG CAATATGCGG CCGACATCGT GCAAACCCGC 
CGACACCTGC ACGCGCACCC CGAACTTTCT TTCCATGAGC GAAATACGGC CCGCTTCGTC
GCCGATCAGC TCAAAGCCAT TGGCATAACC CCGCAGGAAG GCGTAGCCGA TACGGGCCTG
GTGGCCATTG TTGAAGGACG TAACCCCGGC AGTCGGGTTG TCGCGCTTCG GGCCGATATG
GATGCGCTGC CCATTCACGA AGCCAACGAT GTACCGTACA AATCGACCGT CGATGGCGTT
ATGCATGCCT GTGGACACGA TGCACACACG GCCAGTTTGC TTGGTGTTGC CCGTATTCTG
CACGTTTTAC GCGATCAGTT CGATGGCACG GTCAAGCTGG TTTTTCAGCC GGGCGAAGAG
AAAGCACCCG GTGGCGCATC ACTCATGATT AAAGAAGGTG TGCTGGAAAA TCCGGCCCCC
ATGAGCATGA TCGGTCAACA CGTGGCACCC AATATTCCGG TGGGTAAAAT CGGCTTCCGC
GAAGGCATGT ACATGGCCAG TACCGACGAG CTTTACCTGA CCGTTCGCGG CAAAGGGGGC
CACGCGGCCA TGCCGGATAA TCTGGTCGAT CCGGTGCTGA TCGCTTCCCA TATTATTGTT
GCCTTACAGC AGATCATCAG CCGCAACCGG CCGCCGTCCA GCCCGTCGGT TCTGTCGTTT
GGCCGGTTCA TTGCCGATGG CGTTACAAAC GTCATTCCTA ACGAAGTGAC TATTCAGGGC
ACGTTCCGGT GCATGAATGA AGAGTGGCGC GAAGAGGGCA AAAAACGCAT GGTCAAACTG
GCCGAAGGGA TAGCCGAAGC CATGGGCGGC TCCTGCGAAT TCACGATTGT TCATGGATAC
CCGTTCCTGA AAAACCACCC CGAGCTAACC CGGCGCGTTC GGTCGCAGGC TGTCGAGTAT
ATGGGTGCCG AAAACATCGT TGACCTCGAT CTATGGATGG CGGGCGAAGA TTTTGCGTTC
TATTCACAGG TTGTCGACTC CTGTTTTTAT CGACTCGGCA CCCGAAACGA AGCACGCGGT
ATCGTGTCGG GGGTTCACAC GCCCACCTTC GACATCGACG AAGCATCGCT GGAAACGGGT
GCTGGGCTGA TGAGTTGGCT GGCCGTGCAG GAGTTGCGGG TTGTGTAA
 
Protein sequence
MLDSIKSLAR QYAADIVQTR RHLHAHPELS FHERNTARFV ADQLKAIGIT PQEGVADTGL 
VAIVEGRNPG SRVVALRADM DALPIHEAND VPYKSTVDGV MHACGHDAHT ASLLGVARIL
HVLRDQFDGT VKLVFQPGEE KAPGGASLMI KEGVLENPAP MSMIGQHVAP NIPVGKIGFR
EGMYMASTDE LYLTVRGKGG HAAMPDNLVD PVLIASHIIV ALQQIISRNR PPSSPSVLSF
GRFIADGVTN VIPNEVTIQG TFRCMNEEWR EEGKKRMVKL AEGIAEAMGG SCEFTIVHGY
PFLKNHPELT RRVRSQAVEY MGAENIVDLD LWMAGEDFAF YSQVVDSCFY RLGTRNEARG
IVSGVHTPTF DIDEASLETG AGLMSWLAVQ ELRVV