Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4952 |
Symbol | |
ID | 8728716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6036634 |
End bp | 6037230 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389729 |
Protein GI | 284039799 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0639865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAACGC CAACACTTCT CACCGCTGTT TATGCCGACA GTCCATCTGC GTGGCGGCAG TGGCTTGCCG AGAATCACGC GACCGAAACG AGCGTCTGGC TGGCTATCTA CAAGAAGGCA AGTGATAAGC CCAGCGTTAC GTATGACGAA GCCGTAGACG AAGCCCTTTG TTTCGGCTGG ATTGACAGTG CTGTCAGAAA GGGAGATGCC GACCACTACT TTCAGTTTTT CACCCGGCGT AGTCCCAAAA GTAACTGGAG CAGCGTCAAC AAAGCGAAAA TCGATAAACT GCTGAAAGCC GGAAAAATGA CCGAAGCCGG TATGGTAATG GTTGACCTCG CCAAACGAAC TGGTACCTGG ACGGCGCTCG ATGAGGTCGA GAATCTAATC TGTCCACCGG ATTTGGCGGC TGAGTTCAAT GAAAATCCGA CGGCAAAAGG ATATTTCGAT GCATTTCCTA AATCCGTGAA GAGGGGTATT CTGGAATGGC TGCTCAATGC GAAAACGGCC ACAACACGGG CCAAACGTAT TCGGGAAATC GTTACACGGG CCGAACGGAA CGAACGGGCC AATCAGTATG TGCCCAAGTC AAAATAA
|
Protein sequence | MSTPTLLTAV YADSPSAWRQ WLAENHATET SVWLAIYKKA SDKPSVTYDE AVDEALCFGW IDSAVRKGDA DHYFQFFTRR SPKSNWSSVN KAKIDKLLKA GKMTEAGMVM VDLAKRTGTW TALDEVENLI CPPDLAAEFN ENPTAKGYFD AFPKSVKRGI LEWLLNAKTA TTRAKRIREI VTRAERNERA NQYVPKSK
|
| |