Gene Slin_4952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4952 
Symbol 
ID8728716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6036634 
End bp6037230 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389729 
Protein GI284039799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0639865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACGC CAACACTTCT CACCGCTGTT TATGCCGACA GTCCATCTGC GTGGCGGCAG 
TGGCTTGCCG AGAATCACGC GACCGAAACG AGCGTCTGGC TGGCTATCTA CAAGAAGGCA
AGTGATAAGC CCAGCGTTAC GTATGACGAA GCCGTAGACG AAGCCCTTTG TTTCGGCTGG
ATTGACAGTG CTGTCAGAAA GGGAGATGCC GACCACTACT TTCAGTTTTT CACCCGGCGT
AGTCCCAAAA GTAACTGGAG CAGCGTCAAC AAAGCGAAAA TCGATAAACT GCTGAAAGCC
GGAAAAATGA CCGAAGCCGG TATGGTAATG GTTGACCTCG CCAAACGAAC TGGTACCTGG
ACGGCGCTCG ATGAGGTCGA GAATCTAATC TGTCCACCGG ATTTGGCGGC TGAGTTCAAT
GAAAATCCGA CGGCAAAAGG ATATTTCGAT GCATTTCCTA AATCCGTGAA GAGGGGTATT
CTGGAATGGC TGCTCAATGC GAAAACGGCC ACAACACGGG CCAAACGTAT TCGGGAAATC
GTTACACGGG CCGAACGGAA CGAACGGGCC AATCAGTATG TGCCCAAGTC AAAATAA
 
Protein sequence
MSTPTLLTAV YADSPSAWRQ WLAENHATET SVWLAIYKKA SDKPSVTYDE AVDEALCFGW 
IDSAVRKGDA DHYFQFFTRR SPKSNWSSVN KAKIDKLLKA GKMTEAGMVM VDLAKRTGTW
TALDEVENLI CPPDLAAEFN ENPTAKGYFD AFPKSVKRGI LEWLLNAKTA TTRAKRIREI
VTRAERNERA NQYVPKSK