Gene Slin_4951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4951 
Symbol 
ID8728715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6035200 
End bp6036516 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389728 
Protein GI284039798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0822619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATC TATCACTACG CACTACACTT GGTGTTGTTA CTACATTTGC CCTGCTTACC 
ACGGCTTGTG AAGACCACAA GCTGGTTTCC CTGCCTAACT TTCCGGCTGT TGTCGACGCG
ACCAACCCCG GCACGTTTCT GCCAACAATT CTGGCGGATG TCAATGGTGT GAAGGTGTAC
AATGGGGGCT TCGGGTCGGC CATAGCTGCC GATCCGAACG ATCCGGGGGC TTTCTTTATG
CTCACCGACC GCGGACCAAA CATAGATGGT ACAATTGCTA ATTCAAAAGT CTTTGCCGTC
CCGGCCTTTG CTCCTCAAAT CGGCAAATTC CGGGTTAAGA ATGGCTTGAT GACACTCGAA
AAAATCATTG AGTTGAAAAA TAGCGCTGGC GTTAAACTCA ATGGTTTGCC GAACCCGATC
AACGTAGGTG GAACAGGTGA GCTTGCGCTG GACGTAAATG GTAACAATCT GGGAACAAGC
GTTGATGGTA TCGATTCAGA AGGTCTGGCT GTGGCCTCGG ACGGTACCTT TTGGGTAAGT
GATGAGTATG GCCCTCACAT TGTTCATTTC GATGCAAACG GGCAGACAAT AGAGCGTATC
AACCCATTTG GTACGGGTAC CGGTGGCCGA AAAATTCCGC TTGTCTTTGC GAAGCGCCGG
GCCAACCGGG GCATGGAGGG GCTAACCATT ACGCCCGATG GGAAAACGCT GGTGGGTATC
ATGCAGTTTC CTCTCTACAA TCCATCCTCA GCTGCTATTT CGGGCTCCCT GGTGACGCGG
ATACTAACAT TCGATATTGC GACAGGAGCC ACGAAGCAAT TCGTTTACCT GATCGAAAAG
TCGAATCTAC AGGCCATTAG TGAAATTACG GCTGTATCAA ATACAACGTT TCTGGTTCTT
GAGCGGGATG GTGAGTACGG TACTGATACC AATAAATCTA CCCTGTTCAA ACGTGTTTAT
AAAATTGATC TGGCCGGTGC TACGGACATA TCTGACCCCG CCAATGGAGC CAACGGAAAA
CTCTATGGCG GTCAAACCGT TGAAGAACTT AAAACAGCCG CTGCCTTGCA AACAAATGGT
ATCGTTCCTG TAAGCAAGAC ACTTGTTCTG GATTTAGCTA CCGAAACTAC GCCCGTTTAT
CCGCACGACA AGGCGGAGGG AATTGCGCTG ATAAGTCCTA CGCTGCTAGC CGTGTCAAAT
GATGATGATT TTGGCGTGAC AGGCACTGGC ACTTACACCG CCAAAATACT GCCTGCTACC
AATACAATCG ACAAAAACCG GGTGTATTTT ATCACCTTAA AGGCACCCGT AAAGTAG
 
Protein sequence
MTHLSLRTTL GVVTTFALLT TACEDHKLVS LPNFPAVVDA TNPGTFLPTI LADVNGVKVY 
NGGFGSAIAA DPNDPGAFFM LTDRGPNIDG TIANSKVFAV PAFAPQIGKF RVKNGLMTLE
KIIELKNSAG VKLNGLPNPI NVGGTGELAL DVNGNNLGTS VDGIDSEGLA VASDGTFWVS
DEYGPHIVHF DANGQTIERI NPFGTGTGGR KIPLVFAKRR ANRGMEGLTI TPDGKTLVGI
MQFPLYNPSS AAISGSLVTR ILTFDIATGA TKQFVYLIEK SNLQAISEIT AVSNTTFLVL
ERDGEYGTDT NKSTLFKRVY KIDLAGATDI SDPANGANGK LYGGQTVEEL KTAAALQTNG
IVPVSKTLVL DLATETTPVY PHDKAEGIAL ISPTLLAVSN DDDFGVTGTG TYTAKILPAT
NTIDKNRVYF ITLKAPVK