| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4949 |
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| Symbol | |
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| ID | 8728713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6032413 |
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| End bp | 6034137 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003389726 |
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| Protein GI | 284039796 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.528025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTA ATATAGACGC AAAAAAAGAT ATGACCTACG ACGCTATTGT CGTTGGGTCG
GGTATTTCGG GCGGATGGGC TGCCAAAGAA CTTACCCAGA AAGGATTGAA AGTGCTGATG
CTGGAGCGGG GCCGCGATGT AAAACACATT GAAGGCTACC CAACGGCAAC CAATAACCCG
TGGGATTTCC CGCACCGGGG GCGTATCACG ACGATGGCTG CCGAAGAGTA CTGGGCCAAC
ATGCGGACCG GCTATACCGC CAACGAAGAG TGGCGCCACT TCTTCGAGAA CGATAAGGAA
AACCCGTACC TCGAAAAGGA AAACCGTAAA GTAGACTGGA TTCGCGGGTA TCACGTTGGC
GGTCGGTCGC TGATGTGGGG TCGGCAGAGC TATCGCTGGA ACAAGGAAGA TTTCATGGCC
AACGCCAAAG AAGGCATTGG TGTCGACTGG CCAATCCGCT ACGAAGATCT GGCTCCCTGG
TACAGCTACG TAGAAACATT CGTGGGCGTA TCGGGTAGCA AAGACGGTCT GGATGTATTG
CCCGATGGTA ACTTCCTGCC TGCAATGCAG ATGAACTGCC TGGAAAAGGA GGCCAAAAAG
AAAATTGAGA AAGCCTTCCC GGCGCGTATG GTTACCATGG GCCGTACGGC TCACCTGACA
GCCCCCAAAC AACAGCATTA TGACCTCGGA CGGGCGGCCT GTCAGTTCCG GAACCAGTGT
ATGCGCGGTT GTCCATACGG TGCTTATTTC AGCACGCAGT CAGCTACGCT GCCCGCTGCC
ATGAAAACGG GCAAACTAAC GCTCCGCCCC GATTCCATTG TTTCGGAAGT GCTGTACGAT
GAGAAAAAAG GTAAGGCTAC CGGCGTTCGG GTGATCGACC AGAATACCAA AGAAGTTCGT
GAATACTACG CCCGGGTCAT CTTCCTGAAC GCGTCGGCAT TTGCCAGCAC GTCTATCCTG
ATGAACTCGA AGTCGCACCG CTTCCCGAAC GGCATGGGCA ACGAATCTGA TCAGCTTGGC
CGGAATATCA TGGACCACCA CCTGGCTGCG GGTGCTGCCG GAACGTTCGA CGGCATGGAA
GATCAATATT ACTACGGTCG GCGGGCCAAC GGTGTGTACA TTCCACGCTA CCGGAACTGG
CATGGCGACA AGCGCGATTA CGTACGTGGC TTTGGTTACC AGGGTGGTGC CGGTCGTGGT
GGCTGGAACC GGGGCAACGG CATGGACGGA TTCGGTGCCG ACTTTAAGGA AAGCCTTACA
ACGCCCGGAC CATGGACCAT GAGCCTTGGT GGATTTGGTG AGATGATTGC CAACCCCAAC
AACCGGATGA CGCTCTCGCC CGACCAGAAA GACAAGTGGG GCCTGCCGTT GATCGTATTC
GACGCAGCCT ACGGCGAGAA CGAAAAGAAA ATGCGTATCG ACATGATGAA CGATGCGGCC
GAAATGCTCG AAGCCGCTGG TCTGAAAAAC GTAACGCCCT ATAACGACGA AACGAAAAAC
CCCGGTATCG GTATCCACGA AATGGGAACG GCGCGTATGG GCCGCGACCC CAAAACGTCG
GTGCTGAATG CCCACAACCA ACTACACGCG GTGAAGAACG TATTCAATAC GGATGGTGCG
TGTATGACGT CGGCATCCTG CGTGAACCCA TCATTGACTT ACATGGCTCT GACAGCCCGC
GCTGCTGACT TCGCCGTTAA AGAAATGAAG AAAGGTACGC TGTAG
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| Protein sequence | MNLNIDAKKD MTYDAIVVGS GISGGWAAKE LTQKGLKVLM LERGRDVKHI EGYPTATNNP
WDFPHRGRIT TMAAEEYWAN MRTGYTANEE WRHFFENDKE NPYLEKENRK VDWIRGYHVG
GRSLMWGRQS YRWNKEDFMA NAKEGIGVDW PIRYEDLAPW YSYVETFVGV SGSKDGLDVL
PDGNFLPAMQ MNCLEKEAKK KIEKAFPARM VTMGRTAHLT APKQQHYDLG RAACQFRNQC
MRGCPYGAYF STQSATLPAA MKTGKLTLRP DSIVSEVLYD EKKGKATGVR VIDQNTKEVR
EYYARVIFLN ASAFASTSIL MNSKSHRFPN GMGNESDQLG RNIMDHHLAA GAAGTFDGME
DQYYYGRRAN GVYIPRYRNW HGDKRDYVRG FGYQGGAGRG GWNRGNGMDG FGADFKESLT
TPGPWTMSLG GFGEMIANPN NRMTLSPDQK DKWGLPLIVF DAAYGENEKK MRIDMMNDAA
EMLEAAGLKN VTPYNDETKN PGIGIHEMGT ARMGRDPKTS VLNAHNQLHA VKNVFNTDGA
CMTSASCVNP SLTYMALTAR AADFAVKEMK KGTL
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