Gene Slin_4944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4944 
Symbol 
ID8728708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6024287 
End bp6025099 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content51% 
IMG OID 
Product4-diphosphocytidyl-2C-methyl-D-erythritolkinase 
Protein accessionYP_003389721 
Protein GI284039791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTACGT TTCCAACCAG TAAAATCAAC CTGGGCCTTC GTATTACGGA GAAGCGGCCC 
GATGGGTTTC ATAATTTGCA ATCGTGCTTT TATCCCGTAG GCTGGGGTGA CATACTGGAA
GTCATTCCTG CGCCAGCCCA CGAAGTTAGC TTTACCAGCA GTGGGCTACC CATTCCGGGC
AACCCGGAGC AAAACCTTTG TATCCGCGCC TATAATTTAC TGAAAGCCGA TTTCAATCTA
CCTCCGGTGC AGGTGCATCT GCACAAGCTG GTACCTATTG GGGCGGGTTT AGGCGGGGGA
TCGGCCGATG CAGCTTTTGC CCTGAAGTTG CTGAACGAGC AGTTTGCGCT CGGGCTAACA
AACCCACAAC TGGAAGACTA TGCCCGGCTG CTGGGTAGCG ACTGTGCATT TTTTATTCAG
AACCGCCCGT TGTACTGCAC CCAAAAAGGG GATGTGTTTT CGGAGATTGC CGTTGACCTG
AACGGCTACT ATATTGTACT CGTGTACCCT AACCTGGCTA TTTCTACTGC CGAAGCCTAC
GCCGGAATTA AACCCCGCCA ACCCGAAGCC AACCTGTATG AGCAGTTGCT GGAACCTGTT
GCCAACTGGC GGCATACAAT CCATAATGAT TTCGAAGATA GCCTGTTCCC TCACTATCCC
ATATTGCCCC AACTGAAGGC ACAACTCTAC GAATCCGGGG CTGTGTATGC CAGCATGAGT
GGCTCTGGGT CAACCGTCTA CGGCATTTTT AATGCACCTG TCGATATGCC AAACCAATTT
TCAGATTACC GCGTTTGGAA AGGAAAGTTG TAA
 
Protein sequence
MLTFPTSKIN LGLRITEKRP DGFHNLQSCF YPVGWGDILE VIPAPAHEVS FTSSGLPIPG 
NPEQNLCIRA YNLLKADFNL PPVQVHLHKL VPIGAGLGGG SADAAFALKL LNEQFALGLT
NPQLEDYARL LGSDCAFFIQ NRPLYCTQKG DVFSEIAVDL NGYYIVLVYP NLAISTAEAY
AGIKPRQPEA NLYEQLLEPV ANWRHTIHND FEDSLFPHYP ILPQLKAQLY ESGAVYASMS
GSGSTVYGIF NAPVDMPNQF SDYRVWKGKL