| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4940 |
|---|
| Symbol | |
|---|
| ID | 8728704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6019263 |
|---|
| End bp | 6020390 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003389717 |
|---|
| Protein GI | 284039787 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.578764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TCCGCGTCTT ACACATTAGT ACAGCGCACC CGCCACAGGA CCCGCGCGTG
GTGTTCAAGC AATGTCAGAC GCTGGCTTCG GTTTATGAAG TCTTTTGTGC CCTTCCACAT
GCCAACCCGG CGGTTTTGCC AGGTATCCGT TTCATTTGCC TTCCCTATTT TCGTCGGGTC
ATCTGGCGGT TGCTGATCAC CTGCCCCTTT ATTGTACTGC GCTGCATCTG GCTGCGTCCG
CAGCTTGTTC ATGTCTACGC ACCGGAGTTT TTGCCCTTTG CGTACGTATT TCGGCTACTG
GGAGCTCAGG TCATTTATGA AGTACAGGAG AATCTGCACA AAAAATTGCC GCTAAAGACC
AGCAACAACG GGGCTTTGCT CCGGCAGATG TTTCGCCTGT TCGACCGGCT TGCTCAGCGG
CATTTCTACC TCATTTTTAC GGAACACGGG TATTTGAGCA CATACATGCA GCTGGCCAGA
CCCCATGTAG TCGTCTATAA TTACCCGCTT CTGTCCTTTC TGGAACCCTT TTATACACCG
TATAACCCGA GTTCCGAAAC CCCTTCTTTC TTTTATATTG GCCTGCTCAG CTTCGACCGG
GCCGTTGATA CATTGGTTGA TAGCTTCGCC AAATTAGGAA TAACCTACCC CCGGTTCATT
GTGCATCTGT TTGGTCGGCG TACCTTTACG GATACAAATC TGGAAAACCT ATCTGGCTAC
GCCCGGATAC GGGATCATCT CCACTTCTAT GGGTATACAG ACCAGCGTCT TGCTTTTCCG
TACGCCCGTG ATGCCACGGC CGGACTGGCC CTGCTAAAGC CCGTTGGTGA TTATCCAGAA
TCTTATACCA CAAAATTGTT TGAATATATG GCCCTTGGCC TACCCGTTAT TACGTCCGAC
TTTCCACTTT ACCGCGATAT CGTTGACCGT CACCATTGCG GCTTCTGCGT TTCTCCCTAC
AATGCGGCAC AAGTCGCTGA TTCGCTTGCT TACCTTATTG AAAACCCCGA CGAGGCCCGC
CGAATGGGAC AGCGCGGACG GCAGGCTGTT GAGCAGTTTT ACAACTGGTC AACGGAAGCG
GATAAGTTGC TCGACTTCTA TTCGCTCGTT CTTACGACTA CCAAATGA
|
|---|
| Protein sequence | MKKIRVLHIS TAHPPQDPRV VFKQCQTLAS VYEVFCALPH ANPAVLPGIR FICLPYFRRV
IWRLLITCPF IVLRCIWLRP QLVHVYAPEF LPFAYVFRLL GAQVIYEVQE NLHKKLPLKT
SNNGALLRQM FRLFDRLAQR HFYLIFTEHG YLSTYMQLAR PHVVVYNYPL LSFLEPFYTP
YNPSSETPSF FYIGLLSFDR AVDTLVDSFA KLGITYPRFI VHLFGRRTFT DTNLENLSGY
ARIRDHLHFY GYTDQRLAFP YARDATAGLA LLKPVGDYPE SYTTKLFEYM ALGLPVITSD
FPLYRDIVDR HHCGFCVSPY NAAQVADSLA YLIENPDEAR RMGQRGRQAV EQFYNWSTEA
DKLLDFYSLV LTTTK
|
|---|
| |