Gene Slin_4938 details

Gene Information

• Locus tag: Slin_4938
• ID: 8728702
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: +
• Start bp: 6014670
• End bp: 6018062
• Gene Length: 3393 bp
• Protein Length: 1130 aa
• Translation table: 11
• GC content: 53%
• Product: preprotein translocase, SecA subunit
• Protein accession: YP_003389715
• Protein GI: 284039785

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000192031
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATTAACC TGATAGCTAA ATTTTTCGGG ACCAAATCGC AACGGGATAT CAAGGAATTG 
CTTCCCTATG TTGAAAAGGT CAATGCCGAA TTTGCTCAGT TAAAAGCCCT CTCCAACGAC 
GAACTACGTC GGGTATCCGC TGACCTCAAA GCACAGATTG CCGCCGAACT GGCCGACATC 
GACAACCAGA TCAGTGAAAT TAATGAGCAT GTTAGTCATC CTGATGTGGA TGTTAACGAG 
AAAGAGCGGC TCTTCAATCG AATTGACAAG CTCGAAGCCG ACCGTAACAC TGAACTGGAG 
CGTGTGCTGC TTGACATTCT TCCCCGTGCG TTTGCCGTTG TTAAAGAAAC AGCCCGCCGA 
TTTACGGAGA ATGAACAACT GACCGTCACT GCTACGGACT TTGACCGTGA GATTGCTACC 
CGCAAGCGCA ACGTTCAGAT TGACGGTAAC CAGGCCCATT GGTCCAATAC CTGGGATGCT 
GCCGGAACGC CCATCAAATG GGATATGGTG CATTACAATG TCCAGATCAT TGGTGGGGTT 
GTGCTTCACC AGGGTAAAAT TGCCGAGATG GCAACGGGCG AAGGGAAAAC CCTCGTGGCT 
ACTTTCCCGG CCTTCCTCAA CGGTCTGGCC GGTCGGGGCG TGCACATCGT TACGGTCAAT 
GATTACCTGG CCAAGCGTGA CTCCGAATGG ATGGCCCCGC TTTTTGAATT TCATGGTATG 
CGGGTCGATT GCATCGATAA GCACCAGCCC AACTCAGAGC AGCGGAAGCA GGCTTATCTG 
GCCGATATCA CTTATGGTAC CAACAACGAA TTTGGTTTCG ACTACCTGCG CGATAACATG 
GCCCGTGAAC CGAGCGAACT CGTTCAGCGG AAACACCATT ACGCCATGGT CGATGAGGTC 
GACTCCGTAC TGATCGACGA TGCCCGGACA CCGCTCATTA TCAGCGGACC CGTTCCGCGT 
GGCGACGAAC AGGATTATAT CGAGTTGAAG CCCCGCGTAT CCCGTTTGGT CGAAGCGCAG 
CGCAAACTGG TTTACGATTA CCTGAACGAC GCTAAGAAAA AGATTGCCGC TGGCGACGAA 
AAAGAAGGGG GTCTGTCGTT ATTCCGGGCC TATCGTGGTT TACCGAAGCA CAAGCCGCTG 
ATTAAGTTCC TGAGCGAAAC CGGCAACAAA GCCCTGCTTC AGAAAACGGA ATCGATTTAT 
CTGGCTGAAA ACCAGAAGCT GATGCCCGAA GCCGACGCTC CGTTGTATTT CACCATCGAC 
GAGCGACACA ACGGTATTGA CCTGACCGAA AAAGGCATCG ACTACATCAC CGGCTCGGGC 
GAAGATCCGA ACTTCTTCAT CCTGCCCGAC CTGTCCATCG ACCTCAACGC CATTGACAAA 
AGCAGCGACT TCTCGGAGCA GGAAAAAATT CTGCACAAAG AAGCCGTTGT TCGGGATTAT 
GCCGTTAAAA CCCAGCGCAT CAACACCGTC AACCAACTGC TGAAAGCCTA TTGCTTATTT 
GAAAAAGACA CCGAGTACGT GATCATGGAC GGCAAGGTGA AGATCGTGGA TGAGCAAACG 
GGCCGGATTA TGGAAGGTCG CCGGTGGTCG GATGGTCTGC ACCAGGCCGT TGAAGCCAAG 
GAAAACGTAA AAGTTGAAGA CGCTACTCAG ACCTACGCTA CGGTTACGCT CCAGAACTAC 
TTCCGGATGT ACCACAAGCG GGCGGGTATG ACCGGTACGG CCGAAACGGA AGCCTCCGAA 
TTCTGGCAGA TCTACAAAAT GGACGTGGTC GTTATTCCAA CGAACCGGGC CATTAGCCGC 
GCCGACGAAG AAGACAAAGT ATACCGGTCG GTGCGCGAAA AATACAATGC CGTTGTCGAC 
GAGATTACCA GCCTCGTTGA AAAAGGACGG CCGGTACTGG TGGGTACGAC CTCGGTCGAG 
AACTCCGAGT TACTAAGCCG CCTGCTGACG CTCCGCAAAA TTCAGCACCA GGTATTGAAC 
GCCAAATACC ACCAGCGCGA AGCCGAAATT GTGGCTACCG CCGGTTTACC CGGAACTGTC 
ACCATTGCCA CCAACATGGC TGGTCGGGGT ACGGATATTA AATTGACCCC CGAGTCGCGG 
GCAGCGGGTG GTCTGGCCAT CATTGGTACA GAGCGTCACG AATCCCGCCG GGTCGACCGG 
CAGTTGCGTG GCCGGGCCGG TCGTCAGGGC GATCCGGGAA CGTCGCAGTT TTTCGTTTCG 
CTGGAAGACA GCCTGATGCG TTTGTTCGGG TCTGAGCGGA TTGCCAAAGT GATGGACCGC 
ATGGGCCTGG AAGAAGGCGA AGTGATTCAG CACTCGATGA TCACCAAATC CATTGAGCGG 
GCGCAGAAGA AAGTAGAGGA AAACAACTTC GGTATCCGGA AGCGGCTGCT TGAGTACGAC 
GACGTGATGA ACTACCAGCG CGAGGCTATT TACAAACGCC GTCGGAATGC GCTGTTTGGG 
GATCGTCTGC CACTGGATAT TGCCAACACC ATGTACGATG TGGTCGAAGA AACGGTAAAT 
AACGCCGAAG GCAACTACGA AGAGATCAAA CTTCAGTTGC TGACCACACT TGGCCTTTCG 
CCTACTCTGA CAGCGGAGGA GTTCAACCGC TTGAAAAAGC CGGATCAGAC GCGCCGGTTG 
TACGAAGAAG CCGAAGCCAA TTACCAGGCC AAGAACCAGG CGATTGCCGA CAAAGCGTTG 
CCCGTACTGA CGCAGGTTCT CAACGAGCAG GGTCATCAGA TCAAAAACAT CGTTGTGCCC 
TTCTCCGACG GTATGCACGA ACTAACGGTC GTTACCGATC TGCGGAAAGC GGTTGAATCG 
GGCGCGCGCG ACATCGTAAC GGAGATGGAG AAAGCCGTAA CGCTGTCGGT CATCGACCAG 
GAGTGGAAAG AACACCTCCG CGAAATGGAC GACCTGAAAC AGTCGGTTCA GAATGCGGTA 
TTTGAGCAGA AAGACCCGTT ACTTGTTTAC AAGTTCGAGT CCGTCGAGTT GTTCAAGCGC 
TTCCTAAACA AGGTCAATTT CGACACGATC AACTTCCTGA CCAAAGCCGA CATTCCGGCG 
CAGGATGCCG AAGAAGTTCA GCAGGAAATT CGGCAGGCTC CGGTTCAGCA ACGGCCGCAG 
CCGCAACCGC AGCTTCATAC GAACATGGAA GACTTTGACG ACGACCATCT GGCTACCGGC 
CCCGAAGAAT ACGCCCGGCG AATGGCTGAA AACAACGCCA TGGGCGCAGG AGCTCCACCT 
ATGCCGCCCC GTCAGGCTCC GGTACGGGTA GCCAAACTGG ATCGCAACGC CCGCGTTAAC 
GTTCAGTATG TCGATGGTTC GGTGAAGCGC GATGTAAAGT TCAAAACGGT TGAAAACGAC 
GTGGTGAGCG GCAAGGCAAT GCTCATTGAT TAA 

 

Protein sequence

MINLIAKFFG TKSQRDIKEL LPYVEKVNAE FAQLKALSND ELRRVSADLK AQIAAELADI 
DNQISEINEH VSHPDVDVNE KERLFNRIDK LEADRNTELE RVLLDILPRA FAVVKETARR 
FTENEQLTVT ATDFDREIAT RKRNVQIDGN QAHWSNTWDA AGTPIKWDMV HYNVQIIGGV 
VLHQGKIAEM ATGEGKTLVA TFPAFLNGLA GRGVHIVTVN DYLAKRDSEW MAPLFEFHGM 
RVDCIDKHQP NSEQRKQAYL ADITYGTNNE FGFDYLRDNM AREPSELVQR KHHYAMVDEV 
DSVLIDDART PLIISGPVPR GDEQDYIELK PRVSRLVEAQ RKLVYDYLND AKKKIAAGDE 
KEGGLSLFRA YRGLPKHKPL IKFLSETGNK ALLQKTESIY LAENQKLMPE ADAPLYFTID 
ERHNGIDLTE KGIDYITGSG EDPNFFILPD LSIDLNAIDK SSDFSEQEKI LHKEAVVRDY 
AVKTQRINTV NQLLKAYCLF EKDTEYVIMD GKVKIVDEQT GRIMEGRRWS DGLHQAVEAK 
ENVKVEDATQ TYATVTLQNY FRMYHKRAGM TGTAETEASE FWQIYKMDVV VIPTNRAISR 
ADEEDKVYRS VREKYNAVVD EITSLVEKGR PVLVGTTSVE NSELLSRLLT LRKIQHQVLN 
AKYHQREAEI VATAGLPGTV TIATNMAGRG TDIKLTPESR AAGGLAIIGT ERHESRRVDR 
QLRGRAGRQG DPGTSQFFVS LEDSLMRLFG SERIAKVMDR MGLEEGEVIQ HSMITKSIER 
AQKKVEENNF GIRKRLLEYD DVMNYQREAI YKRRRNALFG DRLPLDIANT MYDVVEETVN 
NAEGNYEEIK LQLLTTLGLS PTLTAEEFNR LKKPDQTRRL YEEAEANYQA KNQAIADKAL 
PVLTQVLNEQ GHQIKNIVVP FSDGMHELTV VTDLRKAVES GARDIVTEME KAVTLSVIDQ 
EWKEHLREMD DLKQSVQNAV FEQKDPLLVY KFESVELFKR FLNKVNFDTI NFLTKADIPA 
QDAEEVQQEI RQAPVQQRPQ PQPQLHTNME DFDDDHLATG PEEYARRMAE NNAMGAGAPP 
MPPRQAPVRV AKLDRNARVN VQYVDGSVKR DVKFKTVEND VVSGKAMLID