Gene Slin_4935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4935 
Symbol 
ID8728699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6009317 
End bp6010645 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content31% 
IMG OID 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_003389712 
Protein GI284039782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.378753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.573623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACAAG CAACAAAGAT ATTATCGAAA TTCCATAATA GAGAAAAGCA GTTCTTTTAT 
TCCGCAGCTA GTAGCATTGT TACTAAGTTT GTAAATATTT TAGTTTCTGT GATTTCCTTA
CCTCTAATTT ACAACTGTAT AGGTAAGGAG AGATATGGAA TGATGTTAAC TATTACATCA
ATATCCGCGA TTATTACTTT TGCAGATATG GGCTTAGGGT TTGGTTTACA AAATAAAATA
CCCGTTTTAT CGCGTAAAAG TGATGATAGC TTACATAAAG TAATATCGAG TGCGTTTTTT
TTCTTGATTC TGACATCACT AACAATATTA CTTATATTTT TTCTTATTAG TTTGAATATT
GAATGGTCGA CAACCCTACG CCTTAAATCG TTAATTGCTA TGAACGAAGC AAATATTTCA
GTGTGGATAT TTGCTTTCTG CTTAACTACT GTTATTCCTT TTTCAATTGT ACAAAAGTTG
CAAATTGGCT TACAAGAAGG ATATTTAGTG AACTTTTGGG CTACTGGAGG GAATATTTTT
GGACTTATAT TGTTATATGT TGCTTATATC GAAAAAGCAT CCACGCCAGT TGTTATAATG
GCCATTTATG GTTCCAATGC ATTATTTATA GTATTAAATT TTTTATATCA TTTTATAATT
AGTAAACCAT TATTAATTCC AAAATTTAAG CTGGTCGAAA TTAAATTAAT TAAAGGTATT
ATAAGTGAGA GCTTTTTGTT CTTCTTAGTT CAGATGTTGA GCCTAGTATT ATTCTCAGCC
AATAATTCGC TACTTATTCA TTATCATGGA CCCGATCAAG TCACAGATTT TAATATAGCA
TATAAATTAG CTCTATTATT TTTACTTCCA TTAGAAGCCA CTGCGCCATA TATCACACCG
GCTATAAACG AAGCCATTGT GAGCAAAGAT TACTTGTGGC TGAAAAAAGC TACTAAAAAT
GCAATACTAT TATCAATATT TTTAGCTATT ACTACTTCTT TAGTGACGTA TTTTTTCGGT
AACTTTATAA TTAGTATTTG GCTAGGTGGA AATGTTACGA TAACCAGTAA TGTGATATTT
GCTGTCGCAG CATTTATGTT ACTGTATGCA AACTTAGGTT GTGTTCTTTC TTATATTATG
TTATCAAGTA CATTCATACG TAAAAAAGCT ATAGTCTATA CATTGGCCGT AATTGTATCC
ATCTCACTAA AAGTGTACTT TATAAAAGTG TATGCCGTTG AGGGGGCCTT TTGGAGTACA
ACAATACCAA TGTTTATTTT GTATGTTATT CCTTGTCTGT ACATTTTAAA AACTAAAAAA
GTAGCATGA
 
Protein sequence
MLQATKILSK FHNREKQFFY SAASSIVTKF VNILVSVISL PLIYNCIGKE RYGMMLTITS 
ISAIITFADM GLGFGLQNKI PVLSRKSDDS LHKVISSAFF FLILTSLTIL LIFFLISLNI
EWSTTLRLKS LIAMNEANIS VWIFAFCLTT VIPFSIVQKL QIGLQEGYLV NFWATGGNIF
GLILLYVAYI EKASTPVVIM AIYGSNALFI VLNFLYHFII SKPLLIPKFK LVEIKLIKGI
ISESFLFFLV QMLSLVLFSA NNSLLIHYHG PDQVTDFNIA YKLALLFLLP LEATAPYITP
AINEAIVSKD YLWLKKATKN AILLSIFLAI TTSLVTYFFG NFIISIWLGG NVTITSNVIF
AVAAFMLLYA NLGCVLSYIM LSSTFIRKKA IVYTLAVIVS ISLKVYFIKV YAVEGAFWST
TIPMFILYVI PCLYILKTKK VA