Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4935 |
Symbol | |
ID | 8728699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6009317 |
End bp | 6010645 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_003389712 |
Protein GI | 284039782 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.378753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.573623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACAAG CAACAAAGAT ATTATCGAAA TTCCATAATA GAGAAAAGCA GTTCTTTTAT TCCGCAGCTA GTAGCATTGT TACTAAGTTT GTAAATATTT TAGTTTCTGT GATTTCCTTA CCTCTAATTT ACAACTGTAT AGGTAAGGAG AGATATGGAA TGATGTTAAC TATTACATCA ATATCCGCGA TTATTACTTT TGCAGATATG GGCTTAGGGT TTGGTTTACA AAATAAAATA CCCGTTTTAT CGCGTAAAAG TGATGATAGC TTACATAAAG TAATATCGAG TGCGTTTTTT TTCTTGATTC TGACATCACT AACAATATTA CTTATATTTT TTCTTATTAG TTTGAATATT GAATGGTCGA CAACCCTACG CCTTAAATCG TTAATTGCTA TGAACGAAGC AAATATTTCA GTGTGGATAT TTGCTTTCTG CTTAACTACT GTTATTCCTT TTTCAATTGT ACAAAAGTTG CAAATTGGCT TACAAGAAGG ATATTTAGTG AACTTTTGGG CTACTGGAGG GAATATTTTT GGACTTATAT TGTTATATGT TGCTTATATC GAAAAAGCAT CCACGCCAGT TGTTATAATG GCCATTTATG GTTCCAATGC ATTATTTATA GTATTAAATT TTTTATATCA TTTTATAATT AGTAAACCAT TATTAATTCC AAAATTTAAG CTGGTCGAAA TTAAATTAAT TAAAGGTATT ATAAGTGAGA GCTTTTTGTT CTTCTTAGTT CAGATGTTGA GCCTAGTATT ATTCTCAGCC AATAATTCGC TACTTATTCA TTATCATGGA CCCGATCAAG TCACAGATTT TAATATAGCA TATAAATTAG CTCTATTATT TTTACTTCCA TTAGAAGCCA CTGCGCCATA TATCACACCG GCTATAAACG AAGCCATTGT GAGCAAAGAT TACTTGTGGC TGAAAAAAGC TACTAAAAAT GCAATACTAT TATCAATATT TTTAGCTATT ACTACTTCTT TAGTGACGTA TTTTTTCGGT AACTTTATAA TTAGTATTTG GCTAGGTGGA AATGTTACGA TAACCAGTAA TGTGATATTT GCTGTCGCAG CATTTATGTT ACTGTATGCA AACTTAGGTT GTGTTCTTTC TTATATTATG TTATCAAGTA CATTCATACG TAAAAAAGCT ATAGTCTATA CATTGGCCGT AATTGTATCC ATCTCACTAA AAGTGTACTT TATAAAAGTG TATGCCGTTG AGGGGGCCTT TTGGAGTACA ACAATACCAA TGTTTATTTT GTATGTTATT CCTTGTCTGT ACATTTTAAA AACTAAAAAA GTAGCATGA
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Protein sequence | MLQATKILSK FHNREKQFFY SAASSIVTKF VNILVSVISL PLIYNCIGKE RYGMMLTITS ISAIITFADM GLGFGLQNKI PVLSRKSDDS LHKVISSAFF FLILTSLTIL LIFFLISLNI EWSTTLRLKS LIAMNEANIS VWIFAFCLTT VIPFSIVQKL QIGLQEGYLV NFWATGGNIF GLILLYVAYI EKASTPVVIM AIYGSNALFI VLNFLYHFII SKPLLIPKFK LVEIKLIKGI ISESFLFFLV QMLSLVLFSA NNSLLIHYHG PDQVTDFNIA YKLALLFLLP LEATAPYITP AINEAIVSKD YLWLKKATKN AILLSIFLAI TTSLVTYFFG NFIISIWLGG NVTITSNVIF AVAAFMLLYA NLGCVLSYIM LSSTFIRKKA IVYTLAVIVS ISLKVYFIKV YAVEGAFWST TIPMFILYVI PCLYILKTKK VA
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