Gene Slin_4931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4931 
Symbol 
ID8728695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6005585 
End bp6006319 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content36% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003389708 
Protein GI284039778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.350002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTCTC CCTTAATCTC TGTCATAACG GTAGTATATA ACGCTTATCC TACTCTTGAG 
GCTACTATTC AAAGTGTTAT AAACCAGTCT CAAGAATTAG TAGAATACCT TATTATAGAT
GGTGGAAGTA CTGATGGTTC GGTGGAAATT ATACGCAAGT ATGAAAGTAG ATTAGCTGCT
TGGTGTAGTG AACCTGACAA TGGCATCTAT GATGCCATGA ACAAAGGTAT AGATAGGGCA
AGAGGTGATT GGTTGTACTT TCTTGGAGCT GATGATAAGC TAAATGAAGG TGTTTTAGAG
TTAATAATAC CGTATTTGAA GAGCACTTAT AAAGTGGTTT TCGGCGACGT GATTTTTGAT
AATGGCCATC GTATGCACTC TTATTTGGGC CAAAGAACGA TTTTGCAGAA TACTTTGCAC
CATCAAAGTG CCTTTTATAA TAAATCAAAT TTTGAAAATT TCAGGTATGA TCCCTCACTA
AAGATAGCTT CTGACTATGA TTTAAATATG AAAATTTATA CCGAGAAACA ACCAGTATTA
TACATACCAG TGCTGGTTGC ATATTGTTAT GCGGGTGGTG CTAGCAGTCT TTTAACGCAA
TCACTTCAGG AAACGAATAC GGTACGAAAA CGGTATGTAA AAAGTAATCT TAAAAACTTA
CTTCTAGATT TTTTTCTAAT AATGTATTAT TCCCAGAAGA AAGCTAGGCG ATTCCTGTAT
AATCATCGAG TGTAG
 
Protein sequence
MRSPLISVIT VVYNAYPTLE ATIQSVINQS QELVEYLIID GGSTDGSVEI IRKYESRLAA 
WCSEPDNGIY DAMNKGIDRA RGDWLYFLGA DDKLNEGVLE LIIPYLKSTY KVVFGDVIFD
NGHRMHSYLG QRTILQNTLH HQSAFYNKSN FENFRYDPSL KIASDYDLNM KIYTEKQPVL
YIPVLVAYCY AGGASSLLTQ SLQETNTVRK RYVKSNLKNL LLDFFLIMYY SQKKARRFLY
NHRV