Gene Slin_4927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4927 
Symbol 
ID8728691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6001698 
End bp6002627 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content41% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003389704 
Protein GI284039774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.640418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.791087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCTG TAGTTATTCC AACATATAAT GCTGCGGCCT TTCTGCCTCT TTTGTTAAAT 
AGGCTGAAGG AGCAAACGAT GCCTCATGAA TTGATTATTA TTGATTCCGA ATCGAATGAT
GGTACCGTAG GTCTTATTGA TTCAAAGAAC GTAACTCTTG TATCAATCAA AAAGGAATCC
TTTAATCATG GCTCTAGCCG CAATCTTGGT TTGAAGTTGG CTAAGTACGA TATCGTTGTG
TTTATGACAC AAGATGCCCT TCCTGCTAAT CCAAACACTT TAGAAAGATT GGTAACCATG
CTGACTAGCC AGGGTAATAT TGCGATGGCG TATGGGCGTC AATTACCTTA TCCTGAAACT
GGTATTTTAG GGCGATTCGC TCGTTTAACA AACTATCCCA GATATAGTCT TATTAAGACT
AGAGCATTAA TTCCAGAAAT GGGCATTAAA ACTTGCTCTT GTTCAAACTC ATTTGCTGCT
TATCGTAAAT CTGAGTTACT AACTGTCGGG GGCTTCCCAT CAGATACAAT ACTGGGTGAA
GATGTATCAG TAGCTGCCCG CTTTATTCTT AAAGATTTAG CTGTGGCTTA TTGCGCCGAG
GCTGAAGTGT TTCACTCACA TGATTACACG GTAGTTGAAG AGTTCAAGCG CTATTTTGAT
ATTGGAGTAT TTCATCATGA ACAACGTGCT GTCTTAAATG AGTTTTCTAA GGCAGAGTCA
GAGGGGTTCA AATATGTCAT TCAGGAGTGC AAATACCTTC GCCAAAATGG TCATATTTCG
CTTATACCGC AACAACTAGC GAGGACAGTA GTGAAGTATA TTGGCTATAA GATGGGTAAG
GCCGAAAACC GCCTTCCTAT TGCCTTGAAG CGAAAGTTTA GTATGCATCC TGCTTTTTGG
CAGCCTTCTA CAAGGGAATC GAGCCATTAA
 
Protein sequence
MISVVIPTYN AAAFLPLLLN RLKEQTMPHE LIIIDSESND GTVGLIDSKN VTLVSIKKES 
FNHGSSRNLG LKLAKYDIVV FMTQDALPAN PNTLERLVTM LTSQGNIAMA YGRQLPYPET
GILGRFARLT NYPRYSLIKT RALIPEMGIK TCSCSNSFAA YRKSELLTVG GFPSDTILGE
DVSVAARFIL KDLAVAYCAE AEVFHSHDYT VVEEFKRYFD IGVFHHEQRA VLNEFSKAES
EGFKYVIQEC KYLRQNGHIS LIPQQLARTV VKYIGYKMGK AENRLPIALK RKFSMHPAFW
QPSTRESSH