| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4913 |
|---|
| Symbol | |
|---|
| ID | 8728677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5982311 |
|---|
| End bp | 5983834 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_003389690 |
|---|
| Protein GI | 284039760 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.339374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATACT TCAAGGACAT ACAATCGGGT ATCCGGACAA CGCTGAAGGG GTTGAGCCTG
ACGTTAAGGC ATCTTCGCAA CGCAACCAAA CGCCGAACGG CCGAGGGTAT AGCCAGCGAC
TCGTACTTCG ATTTGCAAAA CGGTCTGGTT ACGCTTCAGT ATCCATACGA ACAGCTGCCC
ATTCCGGATA ATGGCCGCTA CCGGCTTCGG AATGAGATTG AGGATTGCAT CGTCTGCGAT
AAATGCGCCA AAGTCTGCCC CGTTGATTGC ATTACCATTG ATGCCATCAA AGCCACGGAA
GAGGTTGGCC GGGCATCTGA TGGATCGCCG ATACGCCTGT ATGCGGCAAA ATTTGACATC
GACATGGCCA AGTGCTGCTA TTGCGGCCTG TGCACGGTGG TATGCCCCAC CGAATGCCTG
ACCATGGACA AGAAATTCGA TTACAGTGAA TTTGAACTCG GTAAACTGAC GTATAATTTC
TCGAATCTGA CTCCTGAAGA GGCCGATGAA AAACGGTCAT TGTACGAGCA GTTTCTTCGG
GAGAAGGAAG AAGCTAAAGC CGCTCAGATA GCTGCCAAAG CCGCAGCCGC TCCGGCTCAG
GAGCCGGGTG TGAGTGCTCC CGCCCCCAAA CGTCCGGTGT TCAAGCCAAC CGCTAAGCCA
GCTGCTTCGC CCGCAGAACC GGCCAAACCG GCTAATTCGG AAGGGTCATC CATTGAACAC
CCGCTTACGG ACGCCACGCC CGATGAGATG CAGCAAATTG CGCAGGGGGG GCTGGAAGCC
GCCAAACATC CCATATTCCG GCCAACGAAA AAGCCTGCCG TAAACGTAAC CGACGTACCC
GCCGACGACA CGCTTGCCTC AAAGCCCGCA CCTTCCGATA CACCCGAGCC GCCGAAGCCC
GCAGCTAAAC CGGCCGGTTT CCGACCGACG ATGAAGCCGC CCGTTGCCAA ACCAGTCGAA
CCACAGGCGG AGGTTCATCC AGACGCTACA GAGTCAGCAG AAGCACCAAA GCCAAAACCG
GCTTTCCGGC CAACCATGAA GCCACCCGTT GCTAAAGCTG CTGAGACGCA ATCCGAAGGT
CAGCCGGAGG CTACGGCACC GGCAGAAGCG CCGAAACCAA AGCCTGCCTT CCGGCCAACC
ATGAAGCCGC CAACGGCCGC TAAAGCGGAA TCGGATGCAC CACAGGCCAG TTCGGCTGAG
CCCGAAGTTC CCAAAGCAAA ACCGGCGGCT TTTAAACCAA CGATGAAGCC GCCCAAACCG
GTAGAAACGG AGCCAGCGGC ACCAGTAGAA GCGCCGAAAT CGAAACCAGC TTTTCGGCCA
ACTATGAAGC CTGCGGCTGT ACCACAGCCG CCAGTTGAGG AAAGTTTGAC TCCTACACCG
GCCCCTGACA TAAAGGCGGA GGAACCGACA ACACCGGCCG ACGAACCCGT TAAGCCAAAG
CCAGCCGCCT TTCGGCCAAC GATGAAACCT AAGCCGAAAG CTGACGACGA TATTTCCGAT
AAGCCTACTC AATCAGACCA ATAA
|
|---|
| Protein sequence | MSYFKDIQSG IRTTLKGLSL TLRHLRNATK RRTAEGIASD SYFDLQNGLV TLQYPYEQLP
IPDNGRYRLR NEIEDCIVCD KCAKVCPVDC ITIDAIKATE EVGRASDGSP IRLYAAKFDI
DMAKCCYCGL CTVVCPTECL TMDKKFDYSE FELGKLTYNF SNLTPEEADE KRSLYEQFLR
EKEEAKAAQI AAKAAAAPAQ EPGVSAPAPK RPVFKPTAKP AASPAEPAKP ANSEGSSIEH
PLTDATPDEM QQIAQGGLEA AKHPIFRPTK KPAVNVTDVP ADDTLASKPA PSDTPEPPKP
AAKPAGFRPT MKPPVAKPVE PQAEVHPDAT ESAEAPKPKP AFRPTMKPPV AKAAETQSEG
QPEATAPAEA PKPKPAFRPT MKPPTAAKAE SDAPQASSAE PEVPKAKPAA FKPTMKPPKP
VETEPAAPVE APKSKPAFRP TMKPAAVPQP PVEESLTPTP APDIKAEEPT TPADEPVKPK
PAAFRPTMKP KPKADDDISD KPTQSDQ
|
|---|
| |