Gene Slin_4909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4909 
Symbol 
ID8728673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5978876 
End bp5980783 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content54% 
IMG OID 
Productproton-translocating NADH-quinone oxidoreductase, chain L 
Protein accessionYP_003389686 
Protein GI284039756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA ACCCTTTCCA ACTGCCTCAC CTCTTAATGG CTAGCATACT TCTGTTACCC 
TTTGCCGGGT TTCTGGTATT GACAATGGCC AGTCGCCGGG TGGCGCAACT TATTGCAGTT
TTATTGACAG GGGCGGGCTT GCTGTTGTCT GTTTTGCTGG CCGTAAACCT GCCGGAACAA
GGTATTACTC TACAAACGAA TTGGGCGATT TTATCCGGGG CTTCCTTCCC GGTTACGTTT
CGGGTCGATG CGCTGGCCGC GTTGATGCTT CTGCTGGTCC ATTTTGTTGC ATTGCTGGTA
CAAGTTTACT CCATTTCTTA CCTGCACGAC GAGCCGAAGC TGCGTCGCTA TTCCTCTTAT
CTACAGCTAT TTGTGGGGGC GATGCTGGGG ATCGTTCTGG CCGGAAACCT GCTGGTCATG
TACGGTTTCT GGGAGCTGGT AGGTCTGGCA TCGTACCTGC TGATCGGCTT TTACGCCGAG
CGCCCTGCGG CTTCCCAGGC TGCCAAGAAA GCGTTTCTGA TGAACCGTGT GGGCGACATT
GGCTTTTTGA TCGGTATTTT TCTGACCTAT TATTACTTCG ATACGCTCGA TTTCACGGCA
TTGGCCGATA AAGGAGCCGA CGGTATTGCG CCCACCGCCC TTGGCCTTTG TTTATTTATG
GGCTGCGTTG GTAAATCGGC GCAGTTTCCG TTATTGACTT GGCTACCCGA TGCTATGGAA
GGCCCTACTC CGGTGTCGGC GCTGCTTCAC GCGGCCACGA TGGTCGCTGC GGGGATATTT
TTGTTAGCAC GCGTTCACCC GCTCCTGTCG CCCGACGCGC TGGTCGTTAT TACCATTATC
GGAACTATAA CTACGCTTTG GGGCGGTTAT TCGGCTGTTT TTCAAACTGA TATCAAGAAA
GTACTTGCCT TTTCAACGGT GTCGCAACTG GGGCTTATGG TGGTGGGTAT GGGAACGGGA
AATGTTGCCG GGGCTATGTT TCATCTGCTG ACCCACGCCT TTTTTAAAGC GGGTTTGTTT
CTCAGTGCCG GGGCTATCAT TCACGCTGTA CACAGCCAGG ATATGCGGCA GATGGGTGGC
TTGCATAAGG TATTACCCAC CACATTCATT GCCTATACCA TTTGTGCCGC AGCCTTATCC
GGGTTACCGT TTTTGTCGGG CTTTCTTTCG AAAGAGGCCA TTCTGGGCGG GGCGTTTGGC
TGGGCCGAAG CGCAGGCTTC CGGTCTGGCC CTAAGTATAC CCGTACTGGT ACTGTTCTCC
TCTGGTCTGA CGGCTTTTTA TATGGCCCGG CAATGGCGGC TGGTGTTCTT TAGCGCGTAC
CGAAGCGAAA TAACGCCGTT ATCGGCGGCC CACGAACCCG GTTGGCTGAT GCGTGGACCG
GTTGTTATTC TGGCGGCTTT GTCCCTCTGG CTCTGGTTCT CGGTAAATCC ATTGTCCGGT
TCTGGTAGCT GGTTTTTCCG TCTACTGCCG CTGGCCGATG AACCTCATGT CTGGTGGCTG
GCTCCCGTTT CTGTTGCCCT CGTTTTACTG GGGGGCTGGG CTGGCTTTCG ATTACCGGAA
CCCAATGCAG ACCGCCCTTA CGTACAGCTT TCGGTTAACT ATGGTTTTCT GGATCTCTTT
TACGACCGGC TCGCTATCCG GCCAACGGTT AGGCTGGCAG CATTCCTTAA CCGTACCGAC
CAGCGTGCCA TAGATGGGGT TGTTAACGGG GCCGGTATCG TTACCGTTGT ACTGGCGCAT
CTGACAAGTT TGCTGGATCG AATGGGCGTA GATGGCCTGG TAAATGGTGC CGCCTGGCTT
GCTGGCCGAT TGGGGCAGGT GGCCAGGTCG GTGCAGAATG GCCGGGTGCA GTCGTACATT
ACGGCGGCTG TAATGGGATT ACTGGTAATA CTTTGGTGGT TGCTTTAA
 
Protein sequence
MPANPFQLPH LLMASILLLP FAGFLVLTMA SRRVAQLIAV LLTGAGLLLS VLLAVNLPEQ 
GITLQTNWAI LSGASFPVTF RVDALAALML LLVHFVALLV QVYSISYLHD EPKLRRYSSY
LQLFVGAMLG IVLAGNLLVM YGFWELVGLA SYLLIGFYAE RPAASQAAKK AFLMNRVGDI
GFLIGIFLTY YYFDTLDFTA LADKGADGIA PTALGLCLFM GCVGKSAQFP LLTWLPDAME
GPTPVSALLH AATMVAAGIF LLARVHPLLS PDALVVITII GTITTLWGGY SAVFQTDIKK
VLAFSTVSQL GLMVVGMGTG NVAGAMFHLL THAFFKAGLF LSAGAIIHAV HSQDMRQMGG
LHKVLPTTFI AYTICAAALS GLPFLSGFLS KEAILGGAFG WAEAQASGLA LSIPVLVLFS
SGLTAFYMAR QWRLVFFSAY RSEITPLSAA HEPGWLMRGP VVILAALSLW LWFSVNPLSG
SGSWFFRLLP LADEPHVWWL APVSVALVLL GGWAGFRLPE PNADRPYVQL SVNYGFLDLF
YDRLAIRPTV RLAAFLNRTD QRAIDGVVNG AGIVTVVLAH LTSLLDRMGV DGLVNGAAWL
AGRLGQVARS VQNGRVQSYI TAAVMGLLVI LWWLL