Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4902 |
Symbol | |
ID | 8728666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5969737 |
End bp | 5970585 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_003389679 |
Protein GI | 284039749 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.579527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAG TGGCCCTATT GATTTCACCC CTGTTGGCGC TCACCAGTCC GGATGCTTTA TCGCCCGAAT TAACGCAGGA TACTATTCGC CGATCCGGGT CGCAGGGCTC AGAAACTGCG TCGGCTGCCA ATGACGCGCC AAACCAGCTC CGAACTGTAG TTCTCGATGC GGGCCACGGG GGTAAAGATC CCGGCTGCCT AGGCCGAAAA ACCCGTGAGT CGCGGATTGT CCTCAAGCTG GTATTGCAAC TGGGTCGTAA AATTAAGGAA GAGATGCCGA ATGTTCGGGT TATTTATACC CGCGCATCCG ATCATTTTGT GGAACTGGCA GAACGGTCGG CCATTGCCAA TCGAAATAAA GCCGATTTGT TTATCTCGCT GCATTGCAAT GCCAGCCCGT CTTCAAGCCG GGTATATGGT ACCGAAACCT ACACGATGGG GCTACACAAA ACAAACGGAA ATCTGGACGT AGCCAAACGT GAAAACGCGG TTATTCTGAA AGAAGACAAT TATCAGCAGA CGTACAAAGG CTTTAACCCC AATTCACCGC TGGCGCACAT TATGCTTGCC AATTACCAGC ATGCCTTTAT GGGCAGCAGC ATTAACTTTG CCGAGAAAGT TGAACGGAGT TTTCGCCGGA ATGCCGAACG TAAAAGCAAC GGCGTGAAGC AGGCCGGTTT TCTGGTACTC TGGCGTACTA CCATGCCCAG TGTGTTGATC GAGACGGGTT TTCTGACCAA TCCCGACGAA GAAGATTATT TGATTTCTTC CGAAGGGCAG GAGGAAATTT CGGACGCTAT CTACAAGGCG TTCGCTCAAT ACAAGCAGGA GATTGAGGCT GGTGGGTAA
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Protein sequence | MTTVALLISP LLALTSPDAL SPELTQDTIR RSGSQGSETA SAANDAPNQL RTVVLDAGHG GKDPGCLGRK TRESRIVLKL VLQLGRKIKE EMPNVRVIYT RASDHFVELA ERSAIANRNK ADLFISLHCN ASPSSSRVYG TETYTMGLHK TNGNLDVAKR ENAVILKEDN YQQTYKGFNP NSPLAHIMLA NYQHAFMGSS INFAEKVERS FRRNAERKSN GVKQAGFLVL WRTTMPSVLI ETGFLTNPDE EDYLISSEGQ EEISDAIYKA FAQYKQEIEA GG
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