Gene Slin_4902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4902 
Symbol 
ID8728666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5969737 
End bp5970585 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content51% 
IMG OID 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_003389679 
Protein GI284039749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.579527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAG TGGCCCTATT GATTTCACCC CTGTTGGCGC TCACCAGTCC GGATGCTTTA 
TCGCCCGAAT TAACGCAGGA TACTATTCGC CGATCCGGGT CGCAGGGCTC AGAAACTGCG
TCGGCTGCCA ATGACGCGCC AAACCAGCTC CGAACTGTAG TTCTCGATGC GGGCCACGGG
GGTAAAGATC CCGGCTGCCT AGGCCGAAAA ACCCGTGAGT CGCGGATTGT CCTCAAGCTG
GTATTGCAAC TGGGTCGTAA AATTAAGGAA GAGATGCCGA ATGTTCGGGT TATTTATACC
CGCGCATCCG ATCATTTTGT GGAACTGGCA GAACGGTCGG CCATTGCCAA TCGAAATAAA
GCCGATTTGT TTATCTCGCT GCATTGCAAT GCCAGCCCGT CTTCAAGCCG GGTATATGGT
ACCGAAACCT ACACGATGGG GCTACACAAA ACAAACGGAA ATCTGGACGT AGCCAAACGT
GAAAACGCGG TTATTCTGAA AGAAGACAAT TATCAGCAGA CGTACAAAGG CTTTAACCCC
AATTCACCGC TGGCGCACAT TATGCTTGCC AATTACCAGC ATGCCTTTAT GGGCAGCAGC
ATTAACTTTG CCGAGAAAGT TGAACGGAGT TTTCGCCGGA ATGCCGAACG TAAAAGCAAC
GGCGTGAAGC AGGCCGGTTT TCTGGTACTC TGGCGTACTA CCATGCCCAG TGTGTTGATC
GAGACGGGTT TTCTGACCAA TCCCGACGAA GAAGATTATT TGATTTCTTC CGAAGGGCAG
GAGGAAATTT CGGACGCTAT CTACAAGGCG TTCGCTCAAT ACAAGCAGGA GATTGAGGCT
GGTGGGTAA
 
Protein sequence
MTTVALLISP LLALTSPDAL SPELTQDTIR RSGSQGSETA SAANDAPNQL RTVVLDAGHG 
GKDPGCLGRK TRESRIVLKL VLQLGRKIKE EMPNVRVIYT RASDHFVELA ERSAIANRNK
ADLFISLHCN ASPSSSRVYG TETYTMGLHK TNGNLDVAKR ENAVILKEDN YQQTYKGFNP
NSPLAHIMLA NYQHAFMGSS INFAEKVERS FRRNAERKSN GVKQAGFLVL WRTTMPSVLI
ETGFLTNPDE EDYLISSEGQ EEISDAIYKA FAQYKQEIEA GG