| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4899 |
|---|
| Symbol | |
|---|
| ID | 8728663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5963334 |
|---|
| End bp | 5964944 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Methylcrotonoyl-CoA carboxylase |
|---|
| Protein accession | YP_003389676 |
|---|
| Protein GI | 284039746 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGC TCCTCGACGA ACTCGCCCAA CGGTCTGCCC AAACTCAACT TGGTGGTGGC
CAAAAGAAAA TAGATGACCA GCACAAAAAG GGTAAACTGA CCGCTCGCGA ACGAATCGAC
TACCTCACCG ATGACGATAA ACCCTTCGTC GAAATCGGCC TTTTCACAGG CGAGGGCATG
TATGCCGAAC ATGGCGGCTG CCCGGCGGGC GGGGTTGTCG TAGGGATTGG CTATGTATCG
GGGCGGCAGT GTGTTATTGT GGCGAACGAT GCCACAGTAA AGGCCGGTGC CTGGTTTCCG
ATTACGGCTA AAAAGAATCT CCGGGCGCAG GAAATTGCGA TGGAGAATCA GTTGCCCATC
ATCTATCTGG TCGACAGTGC GGGGGTTTAC CTGCCCTTGC AGGACGAGGT GTTTGCTGAT
AAAGAACACT TTGGTCGCAC GTTTCGCAAC AACGCCCACC TCTCGGCGAT GGGTGTTTTA
CAGGTAGCGG CCGTAATGGG CAGCTGCGTA GCCGGGGGAG CTTACTTACC CATTATGTCC
GATGAAGCAC TGATCGTGGA AGGTACCGGC TCTATATTTC TGGCCGGGCC GTATCTGGTC
AAAGCGTCGA TTGGCGAAGA GGTCGACGCT GAAACCCTGG GCGGGGCCGT TACGCATACC
GATATTTCGG GCGTTATCGA CAACCGCTAC CCGGACGATA AGAGTTGTCT GGATGCGATT
AAGCGTATTC TCGATAAAAC GGGGCATCGC CCAACCGCTG GCTTCGACCG AGCCGAACCT
GCCTTACCTG CTAAAAATCC CGCCGATATT TACCAAATCC TCCCCGCCGA CCGGGTAAAA
CCCTACGACA TGCAAGAAAT TGTGGATAGA CTTGTGGATA ACTCGGCCTT CGATGCGTAT
AAACCTGGTT ACGGGCAGTC GCTCATTTGT GGGTACGCCC GAATTGACGG CTGGGCGGTG
GGTATCGTGG CCAACCAGCG GAAAGTGGTG AAGGCTAAAG GCAAAACGGG ACAGCCGACA
GAGATGCAGA TGGGCGGGGT TATTTATGGC GATGCGGCCG ACAAAGCCGC CCGGTTCATT
ATGAACTGCA ATCAGAAGCA GATTCCGCTG GTGTTCATAC AAGATGTATC TGGCTTCATG
GTCGGGAGCC GGGCTGAGCA GGGTGGTATC ATTAAAGATG GGGCCAAGAT GGTCAGCGCG
ATGGCCAATT CGGTAGTACC AAAGTTTACG GTCGTTATTG GTAACAGCTA CGGGGCGGGC
AATTATGCCA TGTGCGGCAA AGCCTATGAC CCTCGGCTGA TGCTGGCCTG GCCAACGGCG
CAAATGGCGG TGATGAGTGG TGCCTCGGCC GCTAAAACCT TATTGCAAAT TCAGGTGGCG
GCTCAGAAAG CCAAAGGCCA GCCCCTGACC CCTGAAGAAG AACAGGCGCA ACTGGATAAA
ATTACCGATC AGTATAATGC TCAGCTTTCG CCCTATTACG CAGCCGCCCG GCTTTGGGTC
GATGCTGTTA TCGACCCGCT CGACACCCGA AAAATCCTGT CAGAAGGGAT CTCGGCGGCT
AACCATGCAC CCATCACGAA GCGATTTTCG GTAGGGGTAA TTCAAACCTA G
|
|---|
| Protein sequence | MQTLLDELAQ RSAQTQLGGG QKKIDDQHKK GKLTARERID YLTDDDKPFV EIGLFTGEGM
YAEHGGCPAG GVVVGIGYVS GRQCVIVAND ATVKAGAWFP ITAKKNLRAQ EIAMENQLPI
IYLVDSAGVY LPLQDEVFAD KEHFGRTFRN NAHLSAMGVL QVAAVMGSCV AGGAYLPIMS
DEALIVEGTG SIFLAGPYLV KASIGEEVDA ETLGGAVTHT DISGVIDNRY PDDKSCLDAI
KRILDKTGHR PTAGFDRAEP ALPAKNPADI YQILPADRVK PYDMQEIVDR LVDNSAFDAY
KPGYGQSLIC GYARIDGWAV GIVANQRKVV KAKGKTGQPT EMQMGGVIYG DAADKAARFI
MNCNQKQIPL VFIQDVSGFM VGSRAEQGGI IKDGAKMVSA MANSVVPKFT VVIGNSYGAG
NYAMCGKAYD PRLMLAWPTA QMAVMSGASA AKTLLQIQVA AQKAKGQPLT PEEEQAQLDK
ITDQYNAQLS PYYAAARLWV DAVIDPLDTR KILSEGISAA NHAPITKRFS VGVIQT
|
|---|
| |