Gene Slin_4890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4890 
Symbol 
ID8728654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5956122 
End bp5956490 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content47% 
IMG OID 
Productendoribonuclease L-PSP 
Protein accessionYP_003389667 
Protein GI284039737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC AAATTGTTTA TACCGACGAA GCACCGGCTC CTATAGGCCC TTATAGCCAG 
GCGGTTAAAA TTAACGGAAC GTTATTCGTT TCAGGTCAGG TTGCCATCGA ACTATCTACC
CAGGGCGATA TTCAGGCCGA AACCCAAAAG GTGATGGAGA ACATCGGGGC TATTCTGAAA
GCAGCCGGTA TGGATTATCC TAACGTGGTT AAGAGCAGTA TTTTCGTGAA AGACATGAAC
AACTTCGCGG CCATCAATGA AGTGTATGGA CGGTTCTTCA CCGAAAACCC GCCCGCCCGC
GAAACCGTAG AGGTAGCCCG TCTGCCTAAA GATGTTAACG TAGAAATTTC TGTAATAGCC
GTCCAATAA
 
Protein sequence
MSKQIVYTDE APAPIGPYSQ AVKINGTLFV SGQVAIELST QGDIQAETQK VMENIGAILK 
AAGMDYPNVV KSSIFVKDMN NFAAINEVYG RFFTENPPAR ETVEVARLPK DVNVEISVIA
VQ