Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4888 |
Symbol | |
ID | 8728652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5953838 |
End bp | 5954683 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | Secreted repeat of unknown function |
Protein accession | YP_003389665 |
Protein GI | 284039735 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA TCGTTTACGT CAGTCCGTCT TTCCTGGCAA TGCTGCTGAT TGTTGTGGCC ATGTTTGGTT GTAATGGAGA TAATCCGGCT ATTGTTTCGC CAGATGTTTC CATTAAAGCT TCATCGGTCG GTAACATCAT GACCGGTGAG GGGGGTAAAA CCCTTTATTT TTACGCAGGC GATGTGGCCG GAGACGGTAC CTGTACTGGC ACCTGTAAGG ACAACTGGCC TGTTTTTTAC AAGGAAACAG CCACGCTTAC TTTAGGGGCT GGTTTAAAGA CAACAGATTT TGCGGTCATT ACGCGGGCCG ATGGGAGCAA GCAGACCACA TTTAAAGGCT GGCCGCTTTA TTACTTCAAA AACGACGCCA AAGCGGGTGA TGTTAACGGC GATAAAGTGG GTAGCGTATG GATGGCGGCC AAAACTAACT ATACCGTTAT GCTTGCTTCG AAACAACTTG TTGGTAATGA CGGTAAAAAT TATACATTTG ATACCAAAGA AGGTACCGCT AATTCACTGT TCCTAGTCGA TAGTGTGGGC CGTACGCTGT ATGCCTTCGC GTTTGATAAG AATAATGTGA ATAAGTATAC AAAAGCGGAC TTGAGCAACG ATGCCACCTG GCCCATCTTT GTAACGACGA CGATTGGTGA AGTACCGTCT CTTTTGGATA AAAATGACTT CAAGATCATT ACAGCAGTGG GCAAATCACA ACTGACGTAC AAAGGCTGGC CGCTCTATTA TTTTGGCCCG GATCAGGGTA TCAGGGGTAA AACGCTGGGC GTAAGCGTGC CAAGGCCGGG TGTCTGGCCA GTGGTCAATA CAACCTCGCC CGTGGCACCC AATTAA
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Protein sequence | MKRIVYVSPS FLAMLLIVVA MFGCNGDNPA IVSPDVSIKA SSVGNIMTGE GGKTLYFYAG DVAGDGTCTG TCKDNWPVFY KETATLTLGA GLKTTDFAVI TRADGSKQTT FKGWPLYYFK NDAKAGDVNG DKVGSVWMAA KTNYTVMLAS KQLVGNDGKN YTFDTKEGTA NSLFLVDSVG RTLYAFAFDK NNVNKYTKAD LSNDATWPIF VTTTIGEVPS LLDKNDFKII TAVGKSQLTY KGWPLYYFGP DQGIRGKTLG VSVPRPGVWP VVNTTSPVAP N
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