Gene Slin_4888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4888 
Symbol 
ID8728652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5953838 
End bp5954683 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content47% 
IMG OID 
ProductSecreted repeat of unknown function 
Protein accessionYP_003389665 
Protein GI284039735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA TCGTTTACGT CAGTCCGTCT TTCCTGGCAA TGCTGCTGAT TGTTGTGGCC 
ATGTTTGGTT GTAATGGAGA TAATCCGGCT ATTGTTTCGC CAGATGTTTC CATTAAAGCT
TCATCGGTCG GTAACATCAT GACCGGTGAG GGGGGTAAAA CCCTTTATTT TTACGCAGGC
GATGTGGCCG GAGACGGTAC CTGTACTGGC ACCTGTAAGG ACAACTGGCC TGTTTTTTAC
AAGGAAACAG CCACGCTTAC TTTAGGGGCT GGTTTAAAGA CAACAGATTT TGCGGTCATT
ACGCGGGCCG ATGGGAGCAA GCAGACCACA TTTAAAGGCT GGCCGCTTTA TTACTTCAAA
AACGACGCCA AAGCGGGTGA TGTTAACGGC GATAAAGTGG GTAGCGTATG GATGGCGGCC
AAAACTAACT ATACCGTTAT GCTTGCTTCG AAACAACTTG TTGGTAATGA CGGTAAAAAT
TATACATTTG ATACCAAAGA AGGTACCGCT AATTCACTGT TCCTAGTCGA TAGTGTGGGC
CGTACGCTGT ATGCCTTCGC GTTTGATAAG AATAATGTGA ATAAGTATAC AAAAGCGGAC
TTGAGCAACG ATGCCACCTG GCCCATCTTT GTAACGACGA CGATTGGTGA AGTACCGTCT
CTTTTGGATA AAAATGACTT CAAGATCATT ACAGCAGTGG GCAAATCACA ACTGACGTAC
AAAGGCTGGC CGCTCTATTA TTTTGGCCCG GATCAGGGTA TCAGGGGTAA AACGCTGGGC
GTAAGCGTGC CAAGGCCGGG TGTCTGGCCA GTGGTCAATA CAACCTCGCC CGTGGCACCC
AATTAA
 
Protein sequence
MKRIVYVSPS FLAMLLIVVA MFGCNGDNPA IVSPDVSIKA SSVGNIMTGE GGKTLYFYAG 
DVAGDGTCTG TCKDNWPVFY KETATLTLGA GLKTTDFAVI TRADGSKQTT FKGWPLYYFK
NDAKAGDVNG DKVGSVWMAA KTNYTVMLAS KQLVGNDGKN YTFDTKEGTA NSLFLVDSVG
RTLYAFAFDK NNVNKYTKAD LSNDATWPIF VTTTIGEVPS LLDKNDFKII TAVGKSQLTY
KGWPLYYFGP DQGIRGKTLG VSVPRPGVWP VVNTTSPVAP N