| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4884 |
|---|
| Symbol | |
|---|
| ID | 8728648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5950201 |
|---|
| End bp | 5950884 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003389661 |
|---|
| Protein GI | 284039731 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATG TTTGTTTTGC CTTGCTGATG TGGCTGGGGA TAAATTCTCT TTGGGCTCAG
GATTCGACAG CCGTTCGTCG CGACACAACG ATAGCCCCCC AAACGGACGC TTCGGCGGCT
GACCTGCTGG CTGGTTTAAG CGACTCAACG GAAGCAAAAA CTGAGTTATT GCCGCATAAA
ATGATATTCA CCCAGCGAGC ATTCTGGGGA CCTAAGGGGT TGCTGCGGTC CATGAACGTG
GCACCCCTGA CGCCTGAAGG TCGTGCCCAT GAGTTGAAAG TTCGCCGGAC GATGCTGGTG
GCGCACCAGA TTGGTGGTTT CGTGACGCTG GCGGGGTTTA TTGCGCAGGG TCTTATCGGC
GCTAAGCTGT ACAACGCCAA GGGGCAGGAC TACGTCGATA CAAAAAAGTG GCATGAGCGT
TCGGCTGCGT TTATCAATGT TACCTACGGC ACTACGCTGT TACTCTCGCT CACGGCCCCT
CCGCCGGTAG TGGGTGCCCG TAAAGGGTTT ACATCCATCA AACTGCATAA ATACCTGGCT
ATCGTTCATC TGACGGGTAT GGTGGCTACC AATATTCTGG CGGGCATGAT CGAAGATAAC
TCATCGCTCA AACCCTATCA CCGGGCGGCT GCTTATACTA CCTTCGGCGC GTATGCGGCT
TCGGTTCTTG CCCTAACTTT CTAA
|
|---|
| Protein sequence | MKYVCFALLM WLGINSLWAQ DSTAVRRDTT IAPQTDASAA DLLAGLSDST EAKTELLPHK
MIFTQRAFWG PKGLLRSMNV APLTPEGRAH ELKVRRTMLV AHQIGGFVTL AGFIAQGLIG
AKLYNAKGQD YVDTKKWHER SAAFINVTYG TTLLLSLTAP PPVVGARKGF TSIKLHKYLA
IVHLTGMVAT NILAGMIEDN SSLKPYHRAA AYTTFGAYAA SVLALTF
|
|---|
| |