Gene Slin_4883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4883 
Symbol 
ID8728647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5949639 
End bp5950196 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content51% 
IMG OID 
ProductYceI family protein 
Protein accessionYP_003389660 
Protein GI284039730 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.831843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCA CAATCAAGTA TAGCTGCTGG CTGGCTATCG GGCTCCTGTG TGCCTTTGTC 
AGCCCAATGG GCAAGCGGAA GCTGGTGGCT GATAAAGCCC TGTCGACCGT TACGTATTCG
GCCAAACACC CGCTGCACAA ATGGGACGGG GTTAGCCACG ACGTTAACTG CGCCGTCATT
TATAACGACG ATACCAAACA GCCCGAAACA GTAGCTGTCT CCCTGAAAGT AGCCTCGTTC
GATAGTGACA ACAACAACCG CGATTCACAC GCCATTGAAG TACTGGATGG GTTGAAGTTT
CCGAACGTAA CCTTTGTCAG CTCCGACATA AAGCCGGGTG AAAACGGGGC CATAGTGGCC
AAAGGCACCC TCACATTTCA TGGGGTTGCC AAACCCGCTA CCTTACAGGC AAGCCGTAAA
GATGCGGGTG GGAAAATGAC GCTGACGGGT GAGTTTCCCG TCAACATGAG CGACCACAAT
ATTGAACGAC CATCGCTGAT GGGCCTGAAA ACTGAAGATG CTATGCTCCT GAAGTTCAAT
GTCGTATTTC CTTTGTGA
 
Protein sequence
MNSTIKYSCW LAIGLLCAFV SPMGKRKLVA DKALSTVTYS AKHPLHKWDG VSHDVNCAVI 
YNDDTKQPET VAVSLKVASF DSDNNNRDSH AIEVLDGLKF PNVTFVSSDI KPGENGAIVA
KGTLTFHGVA KPATLQASRK DAGGKMTLTG EFPVNMSDHN IERPSLMGLK TEDAMLLKFN
VVFPL