| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4882 |
|---|
| Symbol | |
|---|
| ID | 8728646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5948074 |
|---|
| End bp | 5949567 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_003389659 |
|---|
| Protein GI | 284039729 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAACC TGCTTCTGCT GGTTTTTGCC AGTACCACGT TTTCTGCTTT GGCACAAAAG
CAGCTTTCTC CCCAACGGAT TCAGGCATTT GATGCCTATG TAGAAGCTGC CCGTAAAGAC
TGGAACGTGC CGGGACTGTC GATTACGGTC GTCAAAGACA ATAAAGTCAT TTTTAAGAAA
GGGTATGGCG TGCGCGAACT GGGCAAGCCC GAACGCGTGG ATACCCAAAC GCTGTTTGCC
TGTGCGTCGA CGACCAAGGC CATGACCGTT GCGCTTATGG GGATGCTGGT CGATGAAGGT
AAAATTGCCT GGGATGACCC CGTTTCCAGA TACCTGCCCG AACTCAAACT CTATGATCCG
TACGTGACGC AGTCGCTGCG AATCCGGGAT TTGCTCATTC ATGATACCGG CGTTGGCAGC
ACCGACTTTA TGACCGGAGC CATGACCATC CCCGTTAATG AGATGTTTCG GCGTATGGAA
CTGGTGAAGC CGAGTTATCC CTTCCGGGCC GGATTTGCCT ACCAAAATAC CTTTTACTCG
GCCGCCGGTC GCATTATTGA ACGGATCGAG GGGAAAACCT GGGCCGAAGC TATCAAAGAG
CGGATTTTTT TGCCGCTCGG CATGACCCGC ACGGCTCCCA AACGTGGCTA TATAACGGAT
AGCAACGTCA CAAAGCCTCA CTACAACATC AACGATACCA TTACGGTAAT CGACTACGGG
GCCGATAGTG AGGTAGGTTC GGCGGGGGCG GTCTGGTCGT CGGCCGACGA CATCAGCAAG
TGGGTCATCT GCATGCTCGA CAGCAGTAAG TATAGTGGTG GCCGTTTGCT GAAGCCTCAA
ACATGGGCCA AGGTTTTTAC GCCCCAAACG TTCTTCCCGG AAGACGAATA CCCGACCATG
CAACTCCTGA AACCCAACTG GCGAACCTAC GGCCTGGGCT GGTATCAGCA TGACTACAAG
GGCCGGAAAG TGAATTTTCA CACGGGCAGT CTCTCGGGGC TGACGGCCAT AACGGGGCAG
TTGCCGGACG AAAAGCTAGG GATCTTTATT TTCGGAAATT ACGATCATGC CGAAGTTCGC
CACGCGCTGA TGTACAAAGC GTTCGACTGG TTTGCGCTGG GCGGCACCCG CGACTGGAGT
GCTGAGTTTA AGGCGCTGTA CTCGAAAATT AAGCAGGAAG ACAGGAAAGC GAAGGCAGAC
GCTGATGCCA AACGGGTGCC GAACACTACG CCAAGGCTGC CACTGAACGA GTATGCCGGA
CTATACAGCA GTCCCCTTTA TGGAAAGGCC GATGTGATCG TTTCGGACAA TCGGTTAGTT
GTGAACATCA ACGATAATAC TCTGAACGCC ACCTTGGCAC ACTGGCAGTA TGATGTATTT
TACGGCCCCT ATCAAAAAGC CTGGTACGGC AAGGCCAAAG CGCGGTTTAA CGTAGGCGCA
TCGGGCCGGA TCGAATCGCT GATTTTTGAC GGAATGGAGT TTAAGAAAGA GTAA
|
|---|
| Protein sequence | MRNLLLLVFA STTFSALAQK QLSPQRIQAF DAYVEAARKD WNVPGLSITV VKDNKVIFKK
GYGVRELGKP ERVDTQTLFA CASTTKAMTV ALMGMLVDEG KIAWDDPVSR YLPELKLYDP
YVTQSLRIRD LLIHDTGVGS TDFMTGAMTI PVNEMFRRME LVKPSYPFRA GFAYQNTFYS
AAGRIIERIE GKTWAEAIKE RIFLPLGMTR TAPKRGYITD SNVTKPHYNI NDTITVIDYG
ADSEVGSAGA VWSSADDISK WVICMLDSSK YSGGRLLKPQ TWAKVFTPQT FFPEDEYPTM
QLLKPNWRTY GLGWYQHDYK GRKVNFHTGS LSGLTAITGQ LPDEKLGIFI FGNYDHAEVR
HALMYKAFDW FALGGTRDWS AEFKALYSKI KQEDRKAKAD ADAKRVPNTT PRLPLNEYAG
LYSSPLYGKA DVIVSDNRLV VNINDNTLNA TLAHWQYDVF YGPYQKAWYG KAKARFNVGA
SGRIESLIFD GMEFKKE
|
|---|
| |