| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4864 |
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| Symbol | |
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| ID | 8728628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5921962 |
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| End bp | 5924976 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003389641 |
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| Protein GI | 284039711 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.188606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.603613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCGA CCCGATTGCT TGCTGGATTT ATCGGTATAA ACCGCCACGC CGACCAGAAT
ATACCTGACT TAAGCTGCGC TCGGCGGGAT GCCACGGCCC TGTGGGCACT CTGGCAGGAT
ACACTTCTTG AAACGTCCCC GATTTTGTTG GTCGATGAGC AAGCAACGGT TGTTAGAATC
GATGAGGTGT TCGCTCAAAC ACTTGATACG GCCAACGAAC AAGATATTGT ACTCTTGGCT
TTCTCTGGAC ATGGTACTCA CAACCATCGA CTGGTGGCCC ATGATACGGA TAAAGAGAAT
TTGGCCGAAA CGACCATTTC AATGGCAGCT TTAGCTGAGC GGTTCCGTAG AAGCAAAGCC
CGTCATATTC TGCTGGTATT AGATTGTTGC TTTAGTGGTG GCGCGTCAGC TAAAGTGATT
GAAGACGGTT TACAATCACG AGGTAGCGGT TTTTCTCTTG AAGAATCATT CACGGGTAGG
GGGCGGGTCC TGCTGGCTGC AGCTAACGTA GACGAGGAAG CTTGGGAAGT TGATGGACAC
GGATTGCTTA CTTACGCACT AATAGACGCT TTACAAACAT CAGATGGCCC CTTGGAGGTT
GCTCACATGA TGGCTGATGT ATCGGGCCGG GTACGTGCCG AAGCTAATCG TTTCGGTCTG
ACACAAACCC CTAAATGGGT GGGAGACTTT GAGGGTGGCT TCACCCTACC AACCTTACGA
CCTGGGACTA ATTATTATAA AGAATTTCCT GAGAAGACTG GCCTTCACGT CTCTACTGAT
ATTAATGAAT TAGCGGGGTT CAATCTGCCA CAGACGATTC TTTCATCTTG GGCAGCGGCA
TACCCGGATG GTTTAAACGA GCTACAACTA TCTGCTGTCA ACGAATACCG GCTATTGGAC
GGGCAATCTC TCCTTGTAGT GGCTCCAACC AGCAGTGGTA AAACATTCAT TGGAGAAATG
GCTGCTGTCA GGGCCGCAAC AGCAAATCAG CGGGCCGTAT TTCTGTTACC GTATAAAGCC
TTGACTAATG AGAAATATGA AGACTTTACG GCTCTGTACA GTGCAAAGTT AGGCTTGCGT
GTCATTCGTT GTACAGGAGA TTTTCAAGAT TCAACCAACG CATTCATACG GGGGAAATAC
GATATAGCCT TGCTCACGTA TGAAATGTTT CTCAACCTGG TTGTAAAAAA CCAAGGGACG
CTCAACCGCA TTGGTGTCGT CGTTATCGAC GAAGCCCAGT TTATAACCGA GCCTAACCGT
GGCATTATAG TAGAACTTCT ACTCACATAC CTATTAGCCT CCCGTGAACG GGGCATTTCT
CCTCAAGTAG TGGCACTTTC TGCTGTAATT GGTGATACGA ATGGATTCGA GCATTGGTTA
AAGTGTAATG CTCTCATCAG CACCCGTCGG CCAGTGCCTC TCGAAGAAGG AGTCATCGAC
CGCTCGGGCA TATTTGAGTA CATCGATCCT GATACGCTAA CTGTACAAAC CCGTCAATTG
CTGCCACAAG GAGCAGTTGT ACAACGTCGT AAGGAGGCTG GTGCCCAAGA TGTTATTGTT
CCGCTTGCCA ACGTGCTTCT GAAGCAACAA GTTGGAGCTA AACTTATTGT CTTCCGCAAT
ATGCGTGGCA AAGCAGAGGG AGTAGCCGGT TATTTGGCGA AGGATCTAAA TCTACCACCT
GCCCATGATG TGCTGGCGTT ATTACCTTCG AATGATCTTT CAAAGACTTC CGCCCGTTTA
CATGATTGCT TACTAGGAGG TACCGCCTTT CATAATAGCA ATCTATCACG TGAAGAGCGC
GAAGCAGTGG AACGAAGTTT TCGAATAAAG AATGGAAGCG TACATGTTCT GGGAGCGACA
AGCACACTTG CAGCCGGAAT TAATACACCG GCATCCGCAG TAATTTTAGG AGAAACGGAA
TTCGTAGGGG AGGATGGACG TCCATTTACT ATTGCCGAGT ATAAGAATAT GGTTGGCCGC
GCCGGTCGTC TAGGCTACAA CGAACGCGGC CAGTCATTCA TAATTGCCAA CACGACTTTG
GAACGTCGGC ATCTTTTTCA AAAGTACGTT TTAGGTCGAC CTGAACCGCT GCGTTCCTCT
TTTTCAAACA GTCACTTGGC CACATGGGTA CTGCGATTAC TGGCGCAAAT ACCGCGTTTG
CTACGTAATG ATGTATCCTC ATTGCTGGCT AATACATACG GAGGGTATTT AGCCGGTCGT
GCTGATCCGG ATTGGAGACA GCGAACGGAA GTGCATGTCG AGCGGATTAT GGTAGACCTT
ATTCAATACG GTTTGGTGGA ACAAGAAGAC AAGCATGTAC AATTAACACT GTTGGGATTT
GCTTCTGCTA ACTCGTCGCT GGCGTTTCCT TCCATCGTTC GTTTGCTGCA AGTTCTGCAA
CAAATAGGTT CCGCAACGGT AAGTCTGGAA CGGCTGTTGG CTCTTACTCA GGTCTTACCT
GAACTTGACG ATACATATAC GCCACTATTT AAGAATGGTA GCCTTGAAAA GACGTGGCCT
CGCCACGTAG CTATACATTT TGGAGAGGAT ATTGTTCATC TTTATGGACG TTCGTTAACC
GATCCACTGG ATTACTATCG TCGATCAAAA CGAACTTTAG TCGTAAATGA TTGGATAAGG
GGGACCTCAA TGGAAACCAT TGAAAGTACC TATACCAACA ACTCATTTTT ACCAACGAGT
TATGGCGATG TGCGACGTAT AGCTGATGCC ACACGATTTC ACTTACGTTC AGTTGTTCCC
ATCGTTCAAG CACTATATCC GATTCTTGAC TTAAACGATG AGGAATTGGA TACGTTGACC
ACCCGTTTAG AAACTGGCTT ACCGGTTACA GCATTACCCT TAATAAAGAT ATCAACTTTG
ACTCGTGGAG AAATCTTAAT ACTCGTTCAG AATGGGATAC GTGATCCTGC GAATTTATGG
GCACTAGACG AGACTAAGTT AGGTGAACTG ATTGGAATAA ACCGTGCGAT TGAACTTGCG
AAATTCCGGC CCTAA
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| Protein sequence | MSSTRLLAGF IGINRHADQN IPDLSCARRD ATALWALWQD TLLETSPILL VDEQATVVRI
DEVFAQTLDT ANEQDIVLLA FSGHGTHNHR LVAHDTDKEN LAETTISMAA LAERFRRSKA
RHILLVLDCC FSGGASAKVI EDGLQSRGSG FSLEESFTGR GRVLLAAANV DEEAWEVDGH
GLLTYALIDA LQTSDGPLEV AHMMADVSGR VRAEANRFGL TQTPKWVGDF EGGFTLPTLR
PGTNYYKEFP EKTGLHVSTD INELAGFNLP QTILSSWAAA YPDGLNELQL SAVNEYRLLD
GQSLLVVAPT SSGKTFIGEM AAVRAATANQ RAVFLLPYKA LTNEKYEDFT ALYSAKLGLR
VIRCTGDFQD STNAFIRGKY DIALLTYEMF LNLVVKNQGT LNRIGVVVID EAQFITEPNR
GIIVELLLTY LLASRERGIS PQVVALSAVI GDTNGFEHWL KCNALISTRR PVPLEEGVID
RSGIFEYIDP DTLTVQTRQL LPQGAVVQRR KEAGAQDVIV PLANVLLKQQ VGAKLIVFRN
MRGKAEGVAG YLAKDLNLPP AHDVLALLPS NDLSKTSARL HDCLLGGTAF HNSNLSREER
EAVERSFRIK NGSVHVLGAT STLAAGINTP ASAVILGETE FVGEDGRPFT IAEYKNMVGR
AGRLGYNERG QSFIIANTTL ERRHLFQKYV LGRPEPLRSS FSNSHLATWV LRLLAQIPRL
LRNDVSSLLA NTYGGYLAGR ADPDWRQRTE VHVERIMVDL IQYGLVEQED KHVQLTLLGF
ASANSSLAFP SIVRLLQVLQ QIGSATVSLE RLLALTQVLP ELDDTYTPLF KNGSLEKTWP
RHVAIHFGED IVHLYGRSLT DPLDYYRRSK RTLVVNDWIR GTSMETIEST YTNNSFLPTS
YGDVRRIADA TRFHLRSVVP IVQALYPILD LNDEELDTLT TRLETGLPVT ALPLIKISTL
TRGEILILVQ NGIRDPANLW ALDETKLGEL IGINRAIELA KFRP
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