Gene Slin_4860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4860 
Symbol 
ID8728624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5918181 
End bp5918942 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389637 
Protein GI284039707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000563389 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.686099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACTCG CGACAATAGG ACAGAAACTA GCGGTCAGTC TGATGACCAG CTGGCTCAAA 
AAATTTACGG AAGAAAAGCT GCCTCCCGGG CAGTTGCGTA AGTTGTGGTT TGCCAGTAAG
CTGGCCAGCA ATAAGACGCT ATACCGTATT TCGGTCGGGT ACTTATACCG AATAAAACTG
GACGACCAAT ACCTGCTAGT GCGAGGTAAA CGTATTGACC AGTTTCAGCC TGTCGGCGGG
GCCAGAAAAT GGTACGCTCC CGCCCTGGAT GCCTTAGAAA CAATGGGCGT TCGCGATGAC
GATTGTCTAC CCATTGATGA CACGAGTCGG AATGACCTTC GCGTGCGGGT GCCGGCTAAG
AACCTGTTTG ACTTTATACG CTGGTATAAC AAACAGAAAC ACCGGGAGGT AGACCAGACC
CGCGAATTTC AGGAGGAATT GATTAAACCG GGGTTGCTGC CAGCCGATGC GTTTGCCACG
ATCAATGTGC GATACCTCTA CACGGTACCA ACGTTTCACT ATTCCCCCTA CTTTAAATGT
CAGGAGCTGC TCTATCACGA GGTATATGAG TTACTGCCAA CGGCTGCTCA GGAAGCAGCT
TTACGGGCGA CTCAGCAGCA GGACCACGCC GAGTATAAAT GGGTAACTGA AAACCTGATT
GAGCGCCTGG GCTACGATTC AGTGGCAAAG ACCAAGCCAT TCGCCATTGG GGAACATACC
CGACTATTAA TCACCAACAC CACTAACATC TTCACAGACT AA
 
Protein sequence
MILATIGQKL AVSLMTSWLK KFTEEKLPPG QLRKLWFASK LASNKTLYRI SVGYLYRIKL 
DDQYLLVRGK RIDQFQPVGG ARKWYAPALD ALETMGVRDD DCLPIDDTSR NDLRVRVPAK
NLFDFIRWYN KQKHREVDQT REFQEELIKP GLLPADAFAT INVRYLYTVP TFHYSPYFKC
QELLYHEVYE LLPTAAQEAA LRATQQQDHA EYKWVTENLI ERLGYDSVAK TKPFAIGEHT
RLLITNTTNI FTD