Gene Slin_4855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4855 
Symbol 
ID8728619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5913312 
End bp5914145 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content42% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389632 
Protein GI284039702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.177106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT TCGCTGTCGA AGTCATTATA TCCGGGTTAT TGCTGTTAGC GGGCTACTGG 
AGTAATCAGC CCTTTTTGGA GTCGGGTTTC TCGCAGGCTG GGCTGATTAC ATTAACCACT
TTTGTTTTAA CCTTTGTCGT TACCAATTTT AGTCGACTAA CCTTATCCAT CTATTTAATT
TGGTTATCCA TATCTGGGCA ACGCGTGCGC TTTTCGATGG CGTATCTCTA CCTTATTAAA
ATAGAAGATA AATACCTACT GGTAAAAAAT TTCAATTTTG GTCACTATCA ATTGGTTGGT
GGTAAATATA AGCGTTTTGA ACGAACGCAG AGTATTTTAA GCAATGACTT CGAGACCCGC
GATGATTTGA AACTCGCCAA TTCAGGGGGG ATGAAAGATG ATTTTGCGCT TTTTGTTCCA
GCGGCTAAAG CCTTGAAGTT TTTAGATTGG TTCAACACTG GCAAAGACCG GGAAGTATCG
CACTGGCGGG AATTTTACGA GGAACTGATC GAAGGCAAAT CGTCGGTGCT ATCGCAAAAA
AATTTTAAGT ATGTAAATTA TTATTTCAAG GGGACCGTCA GAACGCCAAT TCACACCACG
CCCGGCTGGG GCTGTAAAGA AATTCTTCAG TATGATATTC TTGAACTCAT TCCTACCCCA
ACCCAGTACG ACGAATTAAA AACCCTGTAT GAACAAGGCG ATACCGACTA CATCAAATGG
GCGGATGAAG AATTAATACA ATGTTTGGGT CACTGCAACC GGCAAAAACG ATTGTTATAT
AAAATTGGTG CTCACACAAA ATGGGCAATC AATATGGAGT GGAGCGGCAC TTGA
 
Protein sequence
MKKFAVEVII SGLLLLAGYW SNQPFLESGF SQAGLITLTT FVLTFVVTNF SRLTLSIYLI 
WLSISGQRVR FSMAYLYLIK IEDKYLLVKN FNFGHYQLVG GKYKRFERTQ SILSNDFETR
DDLKLANSGG MKDDFALFVP AAKALKFLDW FNTGKDREVS HWREFYEELI EGKSSVLSQK
NFKYVNYYFK GTVRTPIHTT PGWGCKEILQ YDILELIPTP TQYDELKTLY EQGDTDYIKW
ADEELIQCLG HCNRQKRLLY KIGAHTKWAI NMEWSGT