| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4827 |
|---|
| Symbol | |
|---|
| ID | 8728591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5882082 |
|---|
| End bp | 5882696 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003389604 |
|---|
| Protein GI | 284039674 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.788125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.10965 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATTA ACCCCATCCT AATGAAAACG TACCGTTCTA TTTGTTTTCT TGCACTGCTT
ATTGGCTTAC TCTTACCGTC CTGTAAAGGA CCCGCAGGAG ATCCCGGACC AGTAGGGGCT
ACCGGAACCA CGGGTAATCC TGGGCCCACC GGAGCAACAG GGCCAGCCGG TCCCAAAGGA
GATGCGGGCA ATGCCAATGT GCAGCTCTTT TTGTTTAACA CTCCCAAAAC GTTTGGTTAC
GTCTATAGTC AAAGCGAACT TACCGATTGG ATTGATCAAC GGGACTATAC GATTCCTGTT
AGTAGTGACG TGCTGGCAAA AAGTGTGGTC CTAGTGTACT GCCAAAAGAC GTTTGGTCAG
TTTAGCAGCG CTCAAACCTT TCAGTTACCC GTCACCTTTC CAACGGCGGG CGATGGCTCC
TTACAGTATC TTATTGAGTC AGGCAATGGA ACCTCAACCA TTCGGGTGTT TAGGCCAACC
GGCACAACTA CCTTTTCCAT TGTCCTGCGC GTTGTTGTTA TTCCCGCTTC CACCATCACG
AATGGTCGAC TGCCAGCTAA AGCTAACGAC TACCAACAAG TCCTGAAGCT TTTCAATTTG
TCCGACAAAC CGTAA
|
|---|
| Protein sequence | MSINPILMKT YRSICFLALL IGLLLPSCKG PAGDPGPVGA TGTTGNPGPT GATGPAGPKG
DAGNANVQLF LFNTPKTFGY VYSQSELTDW IDQRDYTIPV SSDVLAKSVV LVYCQKTFGQ
FSSAQTFQLP VTFPTAGDGS LQYLIESGNG TSTIRVFRPT GTTTFSIVLR VVVIPASTIT
NGRLPAKAND YQQVLKLFNL SDKP
|
|---|
| |