Gene Slin_4802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4802 
Symbol 
ID8728566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5858469 
End bp5859272 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content57% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003389579 
Protein GI284039649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC TGCGTGGTCA AGTAGCATTT ATTACCGGAG CGGCACACGG GCAGGGGCGG 
GCTGTCGCGC TGGCGCTGGC TCAGGAAGGT GTTCATATTG TGGCCTTCGA TCTGGCCAAA
CCAATGGCTT ATCCCGGTTA TGCCCTCGGC TCAGAAAGTG AGCTGGATTC GCTGAAGCGG
ACGGTTGAAA CCTTTGGCGT TTCGTGCCTG ACCGCTCAGG GCGACGTTCG ACGGGACGAG
GATATCAAAC GCGCTGTCGA TGCCGCCCTG GGTAGTTTGG GACGGATTGA TATTCTCTTC
AACAATGCGG GCATCTGCGC GTATGGGCTA GTGCACGAAT TACCCGAAGA AGAGTGGGAT
GCCATGCTCG ACATTAACCT CAAAGGCGCT TGGCTGGTAG CCAAACGGGT AATTCCGATT
ATGATGGCAC AGCAATCGGG CGTAATTCTT AACAACTCGT CCATTGCCGG ATTGCGGGGT
ATGAATCGGC TGAGCCATTA CGCGGCCTCC AAATGGGGAC TCGTCGGCCT GACTAAGTCG
TGGGCCATTG AGCTGGCACC GTACAACATC CGCGTCAATT CTATCCACCC GACGGGTGTC
AACACACCCA TGAATGACGG ACTGGCTGAA CTGGAAGGGA CAACCACGCA GGAAATCGCC
GAACGCTCGG CGGGCAACCT GCTGCCGGTT CCCTGGGTAG AGCCCGAAGA CGTTTCGGCG
ATGGTGCTGT TTCTGGTGTC GGATAAAGCA CGGTATGTAA CAGGTTCGCA GTTTGTGCTG
GATGCCGGTT TGCTGACGCG CTGA
 
Protein sequence
MADLRGQVAF ITGAAHGQGR AVALALAQEG VHIVAFDLAK PMAYPGYALG SESELDSLKR 
TVETFGVSCL TAQGDVRRDE DIKRAVDAAL GSLGRIDILF NNAGICAYGL VHELPEEEWD
AMLDINLKGA WLVAKRVIPI MMAQQSGVIL NNSSIAGLRG MNRLSHYAAS KWGLVGLTKS
WAIELAPYNI RVNSIHPTGV NTPMNDGLAE LEGTTTQEIA ERSAGNLLPV PWVEPEDVSA
MVLFLVSDKA RYVTGSQFVL DAGLLTR