Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4802 |
Symbol | |
ID | 8728566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5858469 |
End bp | 5859272 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003389579 |
Protein GI | 284039649 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATC TGCGTGGTCA AGTAGCATTT ATTACCGGAG CGGCACACGG GCAGGGGCGG GCTGTCGCGC TGGCGCTGGC TCAGGAAGGT GTTCATATTG TGGCCTTCGA TCTGGCCAAA CCAATGGCTT ATCCCGGTTA TGCCCTCGGC TCAGAAAGTG AGCTGGATTC GCTGAAGCGG ACGGTTGAAA CCTTTGGCGT TTCGTGCCTG ACCGCTCAGG GCGACGTTCG ACGGGACGAG GATATCAAAC GCGCTGTCGA TGCCGCCCTG GGTAGTTTGG GACGGATTGA TATTCTCTTC AACAATGCGG GCATCTGCGC GTATGGGCTA GTGCACGAAT TACCCGAAGA AGAGTGGGAT GCCATGCTCG ACATTAACCT CAAAGGCGCT TGGCTGGTAG CCAAACGGGT AATTCCGATT ATGATGGCAC AGCAATCGGG CGTAATTCTT AACAACTCGT CCATTGCCGG ATTGCGGGGT ATGAATCGGC TGAGCCATTA CGCGGCCTCC AAATGGGGAC TCGTCGGCCT GACTAAGTCG TGGGCCATTG AGCTGGCACC GTACAACATC CGCGTCAATT CTATCCACCC GACGGGTGTC AACACACCCA TGAATGACGG ACTGGCTGAA CTGGAAGGGA CAACCACGCA GGAAATCGCC GAACGCTCGG CGGGCAACCT GCTGCCGGTT CCCTGGGTAG AGCCCGAAGA CGTTTCGGCG ATGGTGCTGT TTCTGGTGTC GGATAAAGCA CGGTATGTAA CAGGTTCGCA GTTTGTGCTG GATGCCGGTT TGCTGACGCG CTGA
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Protein sequence | MADLRGQVAF ITGAAHGQGR AVALALAQEG VHIVAFDLAK PMAYPGYALG SESELDSLKR TVETFGVSCL TAQGDVRRDE DIKRAVDAAL GSLGRIDILF NNAGICAYGL VHELPEEEWD AMLDINLKGA WLVAKRVIPI MMAQQSGVIL NNSSIAGLRG MNRLSHYAAS KWGLVGLTKS WAIELAPYNI RVNSIHPTGV NTPMNDGLAE LEGTTTQEIA ERSAGNLLPV PWVEPEDVSA MVLFLVSDKA RYVTGSQFVL DAGLLTR
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