Gene Slin_4796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4796 
Symbol 
ID8728560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5848705 
End bp5850099 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389573 
Protein GI284039643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTCA ACGACCCTAA CCTACGTCGC ACCAAACGGC CGGACACTAT CGCTCAGATT 
GGCACTTTTC TGCGCGAACG GTTTAGCCTG GAAGACGACA AAGACGATCA GACCGGGGTA
ATTCAGTCGA TCAGTCGGGG TATTGAGTTC AGAGGAATAA ATCTCTGGAC ACTCATTTTT
GCCATTTTTA TTGCGTCGAT TGGCCTCAAT GTCAATTCTA CGGCTGTGAT CATCGGAGCC
ATGCTTATTT CGCCGTTGAT GGGGCCTATT ATGGGTATCG GGCTGGGGGT TGGTATCAAT
GATCTGGCCA TGATTCTGCA ATCGTTGAAA AACCTCAGCA TTGCAGTGGT TATCAGCCTG
ATTACTTCAA CGGTTTATTT TCTGGTCAGC CCCTTACACA TAGCCCAGTC TGAATTGCTG
GCTCGCACAT CGCCCACCGT CTGGGATGCA TTTATTGCTT TTTTTGGTGG GTTGGCAGGT
ATTGTGGCGG GTTCACGGCG CGAGAAGATC ACCAATGTTA TACCGGGGGT TGCCATTGCT
ACGGCGCTGA TGCCGCCCAT TTGCACGGCG GGTTACGGTC TCTCCATCGG TAACCTTTAT
TATTTCGCCG GGGCTTTTTA CCTGTTTCTG ATCAACAGCG TCTGCATCAG TCTGGCCACA
TTTCTAATTG TTCGGTTTTT GGGCTACCAC CAGAAAGAAT ACCCGACACC GGAAGTTGAA
CGGCGGGTTC GGCACACGAT CTGGGTGGCG GTTTTAATTG TTGTCGTACC TAGTACATAC
CTCGGCTATC AGATTGTCCG GAAAACGATC TTTGAGCAGT CGGCCAAGCG CTTCATCGCC
AACGAGTGCA ATTTTCAGTT TCGACAGGTT ATCAAATACG ATGCTCATTT TAACCGAAAG
CAGAGCAGGC TGGAACTTAC GCTGGTAGGT GAGCCACTGC CCAAGGATTC GATCAACCTG
TTAACCTCAA AGATGGTTGC TTACGGGCTG AACGATGCAA AACTGGTGGT GCGGCAGGGC
AGCTTTAAAG ATGCAACCGT TGATGTCGAT GCCATTACCA CTTCCGTTAC GGATCAGGTA
GTCCGGTATA ATCAGGCGTC GATTGCCGTT AAAGACCAGA CCATCGACTC ACTACGCCGG
TATATTGACC AGACACAATC CGAAAAGTTG CCGATAGCTG ATTTACGCGA CGAGCTAAAA
ACGCTCATGC CCGATGTGCG GACGTTTACC GCAGCGCGGT CGCTGGTGAT GTCGGGCAAC
AGCACGAAGC CCGATACGGT TATGCTGGTG TATGCCCGGT TCTCCCGGCG ACATACGGCG
GCTGAACGGA AGCGTATTGA AAAGTGGCTT CAGACACGAA CGAAAAGTAA GCGGATTAAG
CTGTTAATCG AGTAA
 
Protein sequence
MLVNDPNLRR TKRPDTIAQI GTFLRERFSL EDDKDDQTGV IQSISRGIEF RGINLWTLIF 
AIFIASIGLN VNSTAVIIGA MLISPLMGPI MGIGLGVGIN DLAMILQSLK NLSIAVVISL
ITSTVYFLVS PLHIAQSELL ARTSPTVWDA FIAFFGGLAG IVAGSRREKI TNVIPGVAIA
TALMPPICTA GYGLSIGNLY YFAGAFYLFL INSVCISLAT FLIVRFLGYH QKEYPTPEVE
RRVRHTIWVA VLIVVVPSTY LGYQIVRKTI FEQSAKRFIA NECNFQFRQV IKYDAHFNRK
QSRLELTLVG EPLPKDSINL LTSKMVAYGL NDAKLVVRQG SFKDATVDVD AITTSVTDQV
VRYNQASIAV KDQTIDSLRR YIDQTQSEKL PIADLRDELK TLMPDVRTFT AARSLVMSGN
STKPDTVMLV YARFSRRHTA AERKRIEKWL QTRTKSKRIK LLIE