Gene Slin_4789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4789 
Symbol 
ID8728553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5838211 
End bp5839092 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content55% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003389566 
Protein GI284039636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG TTTGGTTTAT CACCGGAAGT TCAAGAGGGT TGGGCCGCAG CCTTACCGAA 
GCCGTTCTAG CCAAAGGCGA CATAGTAGCC GCCACCGCCC GCAACCCGAG CCAGCTAGCG
GATTTAGTAT CCCGCTATCC CGATCAGATT TACCCCATTG AGCTGGATGT AACGGATAAA
GTGCAGATCA ACGCTGCGGT GGAACAGACA ATAGCCCGGT TTGGGCGTAT CGATGTGCTG
GTAAACAATG CCGGATTTGG TATAACCGGC GCTGCGGAAG CCTTCACGGA CGAACAGGTA
CGCAGTCAGC TGGAAACGAA TCTGTATGCG CCCATCGCGG TAACCCGGGC CATATTGCCC
CATATGCGTC GGCAACGGTC GGGGCGAATT CTGCAAATCA GTTCGATAGG CGGACGGATA
GGCCGGGCGG GCGTGTCCAT CTACCAGGCC GCTAAATTTG GGTTGAGTGG CTTTAGCGAA
TCCCTCCGCG AAGAAGTAGC TCCCCTTGAC ATATGGGTCA CCAGCGTTGA GCCCGGCGGT
TTCCGTACCG ACTGGGCGGG TGACTCCATG AGCTATGCCC CTTCCGTTGA AGGGTACGAG
GAAACCGTTG AAAAACGGGC CGATTACTTC AAAAGTGGCA GCTTTGTGCC CGTTGGCGAC
CCCGAAAAAG CGGCTAAGGT TATGGTCGAT CTGGCCGAAC ACCCCGAGCC GCCAGTTCAC
CTGATACTGG GTAGCGAAGC GGCTGGCCTT CTTCAACAGG CCGATGCTGA CCGAAAGGCC
GAATTCGAAA AATGGCTCCC CGTCACGGTC TCTACCGACC ACGATGAATC AGCTAATTTC
TTTGAAACAG ACCTGGGCAA ACTGTTCACT AAGCAGAAGT AA
 
Protein sequence
MEKVWFITGS SRGLGRSLTE AVLAKGDIVA ATARNPSQLA DLVSRYPDQI YPIELDVTDK 
VQINAAVEQT IARFGRIDVL VNNAGFGITG AAEAFTDEQV RSQLETNLYA PIAVTRAILP
HMRRQRSGRI LQISSIGGRI GRAGVSIYQA AKFGLSGFSE SLREEVAPLD IWVTSVEPGG
FRTDWAGDSM SYAPSVEGYE ETVEKRADYF KSGSFVPVGD PEKAAKVMVD LAEHPEPPVH
LILGSEAAGL LQQADADRKA EFEKWLPVTV STDHDESANF FETDLGKLFT KQK