Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4789 |
Symbol | |
ID | 8728553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5838211 |
End bp | 5839092 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003389566 |
Protein GI | 284039636 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAG TTTGGTTTAT CACCGGAAGT TCAAGAGGGT TGGGCCGCAG CCTTACCGAA GCCGTTCTAG CCAAAGGCGA CATAGTAGCC GCCACCGCCC GCAACCCGAG CCAGCTAGCG GATTTAGTAT CCCGCTATCC CGATCAGATT TACCCCATTG AGCTGGATGT AACGGATAAA GTGCAGATCA ACGCTGCGGT GGAACAGACA ATAGCCCGGT TTGGGCGTAT CGATGTGCTG GTAAACAATG CCGGATTTGG TATAACCGGC GCTGCGGAAG CCTTCACGGA CGAACAGGTA CGCAGTCAGC TGGAAACGAA TCTGTATGCG CCCATCGCGG TAACCCGGGC CATATTGCCC CATATGCGTC GGCAACGGTC GGGGCGAATT CTGCAAATCA GTTCGATAGG CGGACGGATA GGCCGGGCGG GCGTGTCCAT CTACCAGGCC GCTAAATTTG GGTTGAGTGG CTTTAGCGAA TCCCTCCGCG AAGAAGTAGC TCCCCTTGAC ATATGGGTCA CCAGCGTTGA GCCCGGCGGT TTCCGTACCG ACTGGGCGGG TGACTCCATG AGCTATGCCC CTTCCGTTGA AGGGTACGAG GAAACCGTTG AAAAACGGGC CGATTACTTC AAAAGTGGCA GCTTTGTGCC CGTTGGCGAC CCCGAAAAAG CGGCTAAGGT TATGGTCGAT CTGGCCGAAC ACCCCGAGCC GCCAGTTCAC CTGATACTGG GTAGCGAAGC GGCTGGCCTT CTTCAACAGG CCGATGCTGA CCGAAAGGCC GAATTCGAAA AATGGCTCCC CGTCACGGTC TCTACCGACC ACGATGAATC AGCTAATTTC TTTGAAACAG ACCTGGGCAA ACTGTTCACT AAGCAGAAGT AA
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Protein sequence | MEKVWFITGS SRGLGRSLTE AVLAKGDIVA ATARNPSQLA DLVSRYPDQI YPIELDVTDK VQINAAVEQT IARFGRIDVL VNNAGFGITG AAEAFTDEQV RSQLETNLYA PIAVTRAILP HMRRQRSGRI LQISSIGGRI GRAGVSIYQA AKFGLSGFSE SLREEVAPLD IWVTSVEPGG FRTDWAGDSM SYAPSVEGYE ETVEKRADYF KSGSFVPVGD PEKAAKVMVD LAEHPEPPVH LILGSEAAGL LQQADADRKA EFEKWLPVTV STDHDESANF FETDLGKLFT KQK
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