| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4788 |
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| Symbol | |
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| ID | 8728552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5836436 |
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| End bp | 5838124 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | Xylan 1,4-beta-xylosidase |
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| Protein accession | YP_003389565 |
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| Protein GI | 284039635 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.771274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTAC GCGTAACCCT TGGTTTACTG TTTTTAACGG TCCTCCCAGC CGTTGCCCAA
TCAGCAAAAA TGACTAGCCT AAAATCCGTT TCCGGCACGG CACGCTCAAC AATATCTTCC
GTCTGGGTAC CTGATTTGGG AAATGGTTCG TACAAAAACC CCGTCCTGAA CGCCGACTAC
TCCGATCCGG ACGTATGCCG GGCAGGCAAC GACTTTTATC TGGTCGCTTC CAGCTTCGAC
GCCATTCCCG GCCTGCCCAT TCTGCACTCG ACGGATCTGG TCAACTGGAC CCTCATCGGG
CACGCCCTGA AACGCCAGCC TCCGTTCGAC CATTTCGAGA AAACCCAGCA CGGCAATGGG
GTATGGGCAC CGGCCATCCG CTACCACAAC AGCGAGTTCT ACATCTACTA TCCCGACCCC
GATTTTGGCA TTTATCTGAC CAAAGCAACC AATCCGGCTG GCCCCTGGTC GGAGCCGGTG
CTGGTGGAAG GCGGCAAAGG GCTGATCGAC CCCTGCCCGC TCTGGGACAA TGACGGGCAG
GTTTATCTGG CACACGGCTG GGCCGGAAGT AGGGCGGGTA TCAAAAGTAT TCTGACCATC
AAAAAGCTCA ATGCGGCTGG CTCTAAAGTG ACGGATGAAG GCGTTATCGT GTACGACGGT
CACGAAACAG ACCCCACCAT CGAAGGGCCG AAACTCTATA AACGAAACGG CTATTACTAC
ATTTTTGCCC CGGCGGGGGG CGTCTCAACG GGCTGGCAAC TGGCGTTACG ATCCAAAAAT
ATCTACGGCC CTTACGAGCG AAAAGTGGTG ATGGATCAGG GCACAACGTC AATCAACGGA
CCGCATCAGG GCGCGTGGGT AACGGCAAAC GCGGGCAAGG GGAAAGCCGA TGAAGACTGG
TTTCTGCATT TTCAGGATAA GGCCGCCTAC GGTCGGGTGG TGCACCTGCA ACCTATGAAA
TGGGTGAACG ACTGGCCCGT CATTGGCATG GATGCGGACG GCGACGGTAA AGGCGAACCC
GTTTTGACCT ATAAAAAGCC AGCTAATGGG AAAGCATCGC CCATAGCCAC CCCGCCAGAG
TCAGATGAAT TCAACAGCCT GAAACTGGGA GTGCAGTGGC AATGGCAGGC GAATCCAAAA
GGTATCTGGC ACACAACCAG CAACCAGGGC TTTTTGCGGC TCTACTCAGC CAAAGCACCA
GACGAAGCCC GCAACCTGTG GGACGTGCCG AATGTGCTGA TGCAGAAGTT TCCGGCGGAA
ACCTTCATGG CTACTACAAA ACTGACCTTT ACGCCCAACT CGAAGCTGGA AAATGAAAAA
ACGGGGCTGG TCGTAATGGG GCTGAGCTAT GTCGGCCTGA CGCTGAAAAG CGCCAAAGAG
GGTATCCGGC TGGTGTACAG CGTTTGTAAA AAGGCCGCCG ACGGGAAGCC GGAAGACGAA
ACGACCATCA CCCGAGTCCC AGCCAACACG CCGATTTACC TGCGGGTTCA GGTTACGAAG
GGAGCCAAAT GCCAGTTCAG CTACAGCCTG GATGGGCAGA CGTTCACTAA AACCGGCGAC
GAGTTTCAGG CCGAAGTGGG CCGCTGGATT GGGGCAAAAA TGGGGATTTT CTGCACCCGG
ACCACCCAGA TCAACGATTC AGGCTACGCC GATTTCGACT GGTTCCGGGT GGAGCCGAAT
GCGGACTGA
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| Protein sequence | MTLRVTLGLL FLTVLPAVAQ SAKMTSLKSV SGTARSTISS VWVPDLGNGS YKNPVLNADY
SDPDVCRAGN DFYLVASSFD AIPGLPILHS TDLVNWTLIG HALKRQPPFD HFEKTQHGNG
VWAPAIRYHN SEFYIYYPDP DFGIYLTKAT NPAGPWSEPV LVEGGKGLID PCPLWDNDGQ
VYLAHGWAGS RAGIKSILTI KKLNAAGSKV TDEGVIVYDG HETDPTIEGP KLYKRNGYYY
IFAPAGGVST GWQLALRSKN IYGPYERKVV MDQGTTSING PHQGAWVTAN AGKGKADEDW
FLHFQDKAAY GRVVHLQPMK WVNDWPVIGM DADGDGKGEP VLTYKKPANG KASPIATPPE
SDEFNSLKLG VQWQWQANPK GIWHTTSNQG FLRLYSAKAP DEARNLWDVP NVLMQKFPAE
TFMATTKLTF TPNSKLENEK TGLVVMGLSY VGLTLKSAKE GIRLVYSVCK KAADGKPEDE
TTITRVPANT PIYLRVQVTK GAKCQFSYSL DGQTFTKTGD EFQAEVGRWI GAKMGIFCTR
TTQINDSGYA DFDWFRVEPN AD
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