Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4777 |
Symbol | |
ID | 8728541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5815935 |
End bp | 5817071 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_003389554 |
Protein GI | 284039624 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.1793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCT TTTTCCTGAC CGCATTGCTC CTCAGCCCGT CGATGCTCTG GGCACAAACC GGAACCTATA CTCTCAATGG GAAACTTGCC GGTGTCAAAG CCCCCGCCAA AGCGTATCTG CGCTATATGG AGAGCGGGAC GGCCAAAATG GACTCTGCCC AGATTCAGAA CGGAGTTTTT GCATTCAGCG GAAAAGTCGT TACCCCCATG CAGGCAACGC TTTTTGTCGA TAAACTCGGC ACCGGTTTTA GCCGGAACCG ACCCATAGCG GCTACGGCCG TATACCTCGA ACCGGGTACC ATTACCCTAG GCAGCCCCGA TTCGCTCGAA AACGCCCTTG TGAGCGGTAC ACCCCTCAAC GCCGATCTTC AGAAATTAAC GACCCTGCTC AAACCAGCTT CGACCAACAT GGCGCAGCTG ATGAAAGAAT ACCGGTCTGC CAGCCCGGAA CAGCGCAAAT CGAAGGAGTT TGAGGAGAGT TTGGACAAAC GCTACGAAGC GATTGAAGCC GAGCAGAAAA AAGCAAAAAG ACAGTTCATT CTGGCGAATC CAAACTCGCT GGTGAGCCTG AACACCCTGC AGCAATACGA TTATGCACCC GACTATAAAG AAGTAGGTCC GATGTTCGAC GGTTTGTCGG AGTCGCTGAA GACGAGCGAA ACCGGAAAAG CGTATGCCAA AACCCTCGCC ATTGCCAAAG CGACCTCGGT AGGGGCGATG GCTCCCGAAT TTACTCAGGC CGATACGGCG GGCAGGGCGG TGTCGCTGAG CAGCTTTCAG GGAAAATACG TGCTGGTCGA TTTCTGGGCA AGCTGGTGCG GCCCCTGCCG ACAGGAGAAC CCTAACGTGG TGAAGAATTT CCATCAGTAC AAAGACAAGA ACTTTACCGT GCTGGGCGTT TCGCTCGACC GCCCAACGGC GAAAGAAGCC TGGCTGAAAG CCATTCATAA AGATGGGTTG GACTGGACGC AGGTATCGGA CCTAAAATTC TGGGATAATG AAGTGGCCAA GAAGTATGGC GTGCGAGCCA TTCCGCAGAA TTTCCTGATT GGTCCTGATG GTAAGATTGT CGCTAAAAAT GTTCGGGGCG AAGCGTTGGG GAAGAAGCTT GAAGAAATAC TGGCGGCAAA ACCATAA
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Protein sequence | MKRFFLTALL LSPSMLWAQT GTYTLNGKLA GVKAPAKAYL RYMESGTAKM DSAQIQNGVF AFSGKVVTPM QATLFVDKLG TGFSRNRPIA ATAVYLEPGT ITLGSPDSLE NALVSGTPLN ADLQKLTTLL KPASTNMAQL MKEYRSASPE QRKSKEFEES LDKRYEAIEA EQKKAKRQFI LANPNSLVSL NTLQQYDYAP DYKEVGPMFD GLSESLKTSE TGKAYAKTLA IAKATSVGAM APEFTQADTA GRAVSLSSFQ GKYVLVDFWA SWCGPCRQEN PNVVKNFHQY KDKNFTVLGV SLDRPTAKEA WLKAIHKDGL DWTQVSDLKF WDNEVAKKYG VRAIPQNFLI GPDGKIVAKN VRGEALGKKL EEILAAKP
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