Gene Slin_4777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4777 
Symbol 
ID8728541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5815935 
End bp5817071 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content53% 
IMG OID 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003389554 
Protein GI284039624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.1793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT TTTTCCTGAC CGCATTGCTC CTCAGCCCGT CGATGCTCTG GGCACAAACC 
GGAACCTATA CTCTCAATGG GAAACTTGCC GGTGTCAAAG CCCCCGCCAA AGCGTATCTG
CGCTATATGG AGAGCGGGAC GGCCAAAATG GACTCTGCCC AGATTCAGAA CGGAGTTTTT
GCATTCAGCG GAAAAGTCGT TACCCCCATG CAGGCAACGC TTTTTGTCGA TAAACTCGGC
ACCGGTTTTA GCCGGAACCG ACCCATAGCG GCTACGGCCG TATACCTCGA ACCGGGTACC
ATTACCCTAG GCAGCCCCGA TTCGCTCGAA AACGCCCTTG TGAGCGGTAC ACCCCTCAAC
GCCGATCTTC AGAAATTAAC GACCCTGCTC AAACCAGCTT CGACCAACAT GGCGCAGCTG
ATGAAAGAAT ACCGGTCTGC CAGCCCGGAA CAGCGCAAAT CGAAGGAGTT TGAGGAGAGT
TTGGACAAAC GCTACGAAGC GATTGAAGCC GAGCAGAAAA AAGCAAAAAG ACAGTTCATT
CTGGCGAATC CAAACTCGCT GGTGAGCCTG AACACCCTGC AGCAATACGA TTATGCACCC
GACTATAAAG AAGTAGGTCC GATGTTCGAC GGTTTGTCGG AGTCGCTGAA GACGAGCGAA
ACCGGAAAAG CGTATGCCAA AACCCTCGCC ATTGCCAAAG CGACCTCGGT AGGGGCGATG
GCTCCCGAAT TTACTCAGGC CGATACGGCG GGCAGGGCGG TGTCGCTGAG CAGCTTTCAG
GGAAAATACG TGCTGGTCGA TTTCTGGGCA AGCTGGTGCG GCCCCTGCCG ACAGGAGAAC
CCTAACGTGG TGAAGAATTT CCATCAGTAC AAAGACAAGA ACTTTACCGT GCTGGGCGTT
TCGCTCGACC GCCCAACGGC GAAAGAAGCC TGGCTGAAAG CCATTCATAA AGATGGGTTG
GACTGGACGC AGGTATCGGA CCTAAAATTC TGGGATAATG AAGTGGCCAA GAAGTATGGC
GTGCGAGCCA TTCCGCAGAA TTTCCTGATT GGTCCTGATG GTAAGATTGT CGCTAAAAAT
GTTCGGGGCG AAGCGTTGGG GAAGAAGCTT GAAGAAATAC TGGCGGCAAA ACCATAA
 
Protein sequence
MKRFFLTALL LSPSMLWAQT GTYTLNGKLA GVKAPAKAYL RYMESGTAKM DSAQIQNGVF 
AFSGKVVTPM QATLFVDKLG TGFSRNRPIA ATAVYLEPGT ITLGSPDSLE NALVSGTPLN
ADLQKLTTLL KPASTNMAQL MKEYRSASPE QRKSKEFEES LDKRYEAIEA EQKKAKRQFI
LANPNSLVSL NTLQQYDYAP DYKEVGPMFD GLSESLKTSE TGKAYAKTLA IAKATSVGAM
APEFTQADTA GRAVSLSSFQ GKYVLVDFWA SWCGPCRQEN PNVVKNFHQY KDKNFTVLGV
SLDRPTAKEA WLKAIHKDGL DWTQVSDLKF WDNEVAKKYG VRAIPQNFLI GPDGKIVAKN
VRGEALGKKL EEILAAKP