Gene Slin_4752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4752 
Symbol 
ID8728516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5785805 
End bp5786917 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content52% 
IMG OID 
ProductUDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 
Protein accessionYP_003389529 
Protein GI284039599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAA TTATCAGCGG TGGCGGTACG GGAGGGCATA TATATCCCGC TATTGCTATT 
GCCAACGAAC TTAAGGCCAT AGATCCTAAA ACGGAAATTC TGTTTGTGGG TGCTGAGGGT
AAAATGGAAA TGGAAAAAGT ACCCCGCGCT GGTTATACCA TCGTGGGCTT GCCTGTAGTG
GGCATCAAAC GTGAACTGAC ACTGTCGAAT CTGGCCTTTC CATTTAAACT GGGCCGGAGT
TTACTACGAG CGCAACAGAT TGTCCGCGAG TTCAAACCCG ATGCCGCCGT AGGGGTAGGT
GGCTATGCCA GCGGACCACT GCTTTTGGCA GCTTCCCTGA AAGGCATACC AACGCTTATT
CAGGAACAAA ATTCCTATGC AGGCCTGACC AACAAAGTGC TGGCTCGCTG GGCAAAACGC
ATTTGCGTGG CTTACCCCGG GATGGACGCT TTTTTTGCGG CAGATAAAAT CAAGTTAACG
GGCAATCCCG TGCGCAGTGA TATTCAGTTT GCCAGTCAAC AGGTTGAAAC GGGGCGAAGG
CTATTCGGCA TTGACGGCAA TCACCCAACG CTGCTGATTA TTGGCGGCAG CCAGGGCGCG
CGTACCATCA ATGAAAGCAT TGAAGGAGGG TTGCAACGGT TTGTCGACGC GGGCATACAG
CTCATCTGGC AAACGGGACC AGCCTTTATT GAGCGGGCCA AAGCAGCCGT AGCAGCAACC
GGCTCATCGC TCATTAAAGC GTATGACTTT ATTTATGACA TGGATAAAGC CTATGCCGTT
GCCGATTCCG TAGTGTCGCG GGCGGGTGCC TTGTCGGTAT CTGAGTTGTG TCTTGTCGGA
CGTCCGGCTA TTCTGGTTCC CCTACCTACA GCGGCAGAAG ACCACCAGAC AAAGAATGCG
ATGAGCCTGG TAGAGCATCA CGCAGCCCTG CTCGTTAACG ACCGGGCCGC TCGTGAAGAG
CTGGTAACGG CGGCCCTGAA TCTGCTGGCA AACCCCGCCC AGCAGCAAAA GTTGAGCCAG
CAAATAAAAA CGCTGGGCAA ACCCAATGCC GCCCGTGATA TTGCCAATGA AGTAATTAAA
CTAGCTAAGC CAGAATCTGG ATTGGCCATA TAA
 
Protein sequence
MRIIISGGGT GGHIYPAIAI ANELKAIDPK TEILFVGAEG KMEMEKVPRA GYTIVGLPVV 
GIKRELTLSN LAFPFKLGRS LLRAQQIVRE FKPDAAVGVG GYASGPLLLA ASLKGIPTLI
QEQNSYAGLT NKVLARWAKR ICVAYPGMDA FFAADKIKLT GNPVRSDIQF ASQQVETGRR
LFGIDGNHPT LLIIGGSQGA RTINESIEGG LQRFVDAGIQ LIWQTGPAFI ERAKAAVAAT
GSSLIKAYDF IYDMDKAYAV ADSVVSRAGA LSVSELCLVG RPAILVPLPT AAEDHQTKNA
MSLVEHHAAL LVNDRAAREE LVTAALNLLA NPAQQQKLSQ QIKTLGKPNA ARDIANEVIK
LAKPESGLAI