Gene Slin_4740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4740 
Symbol 
ID8728504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5775615 
End bp5776823 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content52% 
IMG OID 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_003389517 
Protein GI284039587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000637951 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTATT ACCTCTTCCA GTTTCTTGAC GAACGCTATA ACTTTCCCGG CGCGGGGGTT 
TTCCAGTACA TCTCCTTCCG GGCGCTGGGT GCCGTAATCA CGTCGCTTCT GATCGCAGCC
ATCTTCGGGC GACGCATTAT CGACACCCTG CGAAACCTTC AGATTGGCGA GTCGATCCGC
GATTTGGGGC TGGAAGGGCA AATGCAGAAA CGAGGGACCC CAACCATGGG CGGATTTATC
ATTCTGGCCT CCCTGCTGAT TCCGGCGCTG CTCTTTGCGA AACTAACAAA TGTCTACGTC
GTGCTGGCGC TGGTATCTAC CGTCTGGACC GGCATGATCG GCTTTCTGGA CGACTACATT
AAAGTATTCA AGAAAAACAA AGAGGGCCTG GAGGGGAAGT TTAAAGTAGT TGGACAAGTG
GGTCTGGGCC TTATTGTCGG GCTAACGCTG TACTTCAACG ACTACGTAAA GATCAGGAAG
TACGCTCCCC GCCTGTTCAG CACCTCGAAT GTGCCAGATG TGTACACCGA TATTAAGTCG
ACGCTCACCA CGGTGCCCTT CGTCAAAAAC AACGAGTTCG ACTATAGCTC GTTGCTGTTC
GGGTTTCTAC CGGATAGTTA CACCTGGATT ATCTATGTGC TGATCTGTAT TTTTATCATC
ACGGCCGTTT CCAACGGGGC AAACATTACC GACGGCATCG ACGGTCTGGC GGCTGGTACG
TCCGTCATTA TCGGCCTAAC CATTGGCGTA CTGGCTTATT TATCGGGTAA CAAGGTTTTC
TCGCAGTACC TGAACATCAT GTACATTCCG AATGCCGGTG AGCTGGTAAT TTTCTGCGCG
GCTTTTGTGG GGGCCTGCGT TGGCTTTCTC TGGTACAACT CCTACCCGGC GCAGGTATTC
ATGGGCGACA CGGGTAGTTT AATGTTAGGG GGCGTAATTG CGGTGTTGTT TCTGGCGATC
CGAAAGGAGT TGATGATTCC GATCATCTGC GGCATTTTCC TGGTCGAGCT GGTCTCCGTC
ATTATGCAGG TCAGCTATTT TAAATACACC AAACGAAAGT ATGGCGAGGG TAGGCGAATT
TTCCTGATGT CGCCCCTGCA CCACCATTTT CAGAAGAAAG GCTACCACGA AGCCAAGCTC
GTTACGCGCT TCTGGATCGT CGGCATTATC CTGGCGGTAC TGGCTTTAGC CACGCTGAAG
CTGCGGTAA
 
Protein sequence
MLYYLFQFLD ERYNFPGAGV FQYISFRALG AVITSLLIAA IFGRRIIDTL RNLQIGESIR 
DLGLEGQMQK RGTPTMGGFI ILASLLIPAL LFAKLTNVYV VLALVSTVWT GMIGFLDDYI
KVFKKNKEGL EGKFKVVGQV GLGLIVGLTL YFNDYVKIRK YAPRLFSTSN VPDVYTDIKS
TLTTVPFVKN NEFDYSSLLF GFLPDSYTWI IYVLICIFII TAVSNGANIT DGIDGLAAGT
SVIIGLTIGV LAYLSGNKVF SQYLNIMYIP NAGELVIFCA AFVGACVGFL WYNSYPAQVF
MGDTGSLMLG GVIAVLFLAI RKELMIPIIC GIFLVELVSV IMQVSYFKYT KRKYGEGRRI
FLMSPLHHHF QKKGYHEAKL VTRFWIVGII LAVLALATLK LR