| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4723 |
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| Symbol | |
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| ID | 8728487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5752104 |
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| End bp | 5755343 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | NHL repeat containing protein |
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| Protein accession | YP_003389500 |
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| Protein GI | 284039570 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.645184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTAC TGAAACCAAT TCAAATGCTA AAATTTTACC CGCCAACCGG CCTCGATAGG
TCGGCGACTA ACTCGTTTCG TCCTGACGCC AGTTGGGTCA GCCGACTAAC CTGCTTAGTC
GTATTTCTTT TACTGAGCCT GAGCAGCCCA TTGCTAGCGC AATATAATTC CAACGCCGTA
ACAGTTGCCG GTACCGGTAC CGCTGGTTCA GCCGCTAATC AGTTAGATAG TCCCTTCGGT
ATTTATGTTG ACGAAGCCGG AAGCATGTAT GTAGCTGATT ACAACAACCA CCGCGTCCAG
AAATGGGCCT CGGGGGCTAC CTCCGGAACT ACTGTAGCCG GTACCGGTAC CGCTGGTTCA
GCCGCTAATC AGTTAAATCA TCCTCTTGGT GTGTATGTAG ACGGAGCGGG AGCCATCTAT
GTGTCTGACA CCGATAACAA TCGCGTCCAG AAATGGGCCT CGGGAGCTAC CTCCGGAACT
ACAGTGGCCG GTACCGGTAC CGCCGGTTCA GCTGCGAATC AGTTGAATTA TCCTATAGGT
ATCTATGTAG ACGGAGCGGG AGCCACCTAT GTGGCTGATG CTTCTAACTC ACGCATTCAG
AAATGGGCTG CGGGAGCCAC ATCCGGTACT ACCGTCGCCG GGGGGAATGG ACAAGGCTCA
GCTGCCAATC AGCTTTGGAG TGCAGCGGGT GTGTATATAG ACGGAGCAGG AGCCATTTAT
GTGGCTGACG GCGGAAACAA CCGCATCCAG AAATGGGCCT CAGGGGCCAC ATCCGGTACC
ACCGTGGCCG GTACCGGAGT ATATGGACCC GCCAGCAATC AACTATCATA CCCATTTGCT
GTGTATGTTG ATGGAGCGGG CACGATGTAT GTGAGCGACC AGCAATCTCA CCGCATTCAG
AAATGGACTG CGGGGGCGAC CTCGGGTACC ACCGTAGCCG GGGGGTACGG CAATGATGCT
CTGGTGCCTT ATCAGTTAAA TTACCCAAGA GGTATTTATC TTGACAGGGC CGGAGCCATC
TATGTAGCCG ACCAACGCAA CAACCGCATC CAGAAGTTTA GTCGCATCAA TCCACTCGTC
AACCCTTCCC TGACCATCGC CACAACGAGT CAGACCAGTT GTACAGGCGC ATCGGTGAGC
TTCACCGCCA CTTCCACCAA TGGCGGCACC AGCCCCGCTT ACCAGTGGAA AAAGAACGGC
TCCAATGTGG GCACCAGTGA CGCTACCTAT ACCGATGCGG CCCTGACTAG TGGCGATGTC
ATTAACTGCG TGCTCACCAG CAATGATCAA TGGGCCTCCC CTACCACGGC CACCAGCAAT
AGCCTGACGA TGACGGTCAA CCCGCTACTT ACCCCGGCCC TCACCCTTGC CATTACCACC
GGCAGTCAGA CCAGCTATGC GGGCACCGCC ATCACGTTTA CCGCTACGCC TATCAATGGC
GGTACCAACC CCAGATACCA GTGGAGAAAG AACGGCACCA ACGTGGGCAC CAACAGTGCC
ACCTACACTG ATTTCGCCCT GGCCAACAAT GACCTGATCA GCTGTATACT TGTCAGCAAC
GTCACCTGCT ATACCACGCC CACCGCTGAC AGCAATAGCC TGAAGATGAC CGTCATCGCT
CTGGTAACGC CTACCCTCAC CATCGCCACC GGTAGCCAGA CCAATTGCGC AGGCAAATCA
GTCAGTTTCA CCGCTACGCC TACCAATGGC GGTAGCAGCC CCGCCTACCA GTGGAAAAAG
AACGGCTCCA ACGTGGGCAC CAACAGTGCC ACCTATACCG ATGCCGCCCT GGCCAACAAT
GACGTGATCA GTTGTGTGCT CACCAGCAAT GCCCCCGGAA CTACGACCAG CACGGCCACC
AGCAACAGCC TGACGATGAC GGTCAACCCG CTACTTACCC CGGCCCTCAC CCTTGCCATT
ACCACCGGCA GTCAGACCAG CTATGCGGGC ACCGCCATCA CGTTCACCGC TATGCCTACC
AATGGCGGTA CCAACCCGGC CTACCAGTGG AAAAAGAACG GCTCCAACGT GGGCACCAAC
ACGGCGACCT ACACTGATTT CGCCCTGGCC AACAATGATG TTATCAGTTG TGTGCTCACC
AGCAACGTCA CCTGCCCCAC CACGCCCACC GCTACCAGCA ATGACCTGAC CATGACCGTC
ATCGCTCTGG TAACGCCCAC CCTCACCATC GCCACCACCA GTAGCCAGAC CAGTTGTGCA
GGTACATCAG TCAGTTTCAC CGCTACGCCT ACCAATGGCG GTAGCAGCCC CGCCTACCAG
TGGAAAAAGA ACGGCTCCAA CGTGGGCACT AACACGGCGA CCTACACCGA TGCCGCCCTG
GCCAACAGTG ACGTGATCAG CTGTGTGCTC ACCAGCAATG CCCCCGGAAC TACGACCAGC
ACGGCCACCA GCAATAGCCT GACGATGACG GTCAACGCCC GGCCCGATGC GCCCGCCCTG
ACCCCCGCCA GCTCTAGTCT GGCAGCGACT CTGACACCCC TCTCGCTGAC GAGCTTTGCA
CTGGCAACCA CCGGCAATAG CCTCCACTTC TTCCAAGCCG GAGGTAGTGA ACTCAGCCCC
CCTACCGTCA GTATCGCCAC TGCCGGGGTT ATGAGCTTTT CGGTCGGCCA GACCAACAAC
GCCAGCGGCT GCAAGAGTTT ACTCACGCCA TTGAGTCTGA CCATCACGGC CACCCCCACC
AGCCAGACCG TTTGCCGCAG TAGCAACGCC ACTCTGAACG TCACTCTGGT GGGAACCGCC
TTCCAGTGGT ACAAAAACGG TACTACCACA GCCAACAAAC TCACCGAGCT GACCAGTGCC
CAGCGCGGTA CGACCACCGC CACCCTGACA CTGGTCAATT TGCAAACCAC CGCCGACTAC
TACTGCAAAA TCACTACTTC CACCGGCGTT CAGACCGTGG GGCCCCTGAA GGTGAGTGTC
AACTTTGGCT GTTCGGCCCG GCCTGCGGCC GAGGAAGCAG ACTTGCAACT ATTGGTACTG
GTCAGGCCAA ACCCTATCGT AGACGGCCAC CTGCGGGCCC TGGTGAAGGG GGCTCAGGGG
CAAGCCCTGA ACGTAGCCCT CTACAGTCTG CAAGGGGAGT TGGTGAACCA GCAGGTCTGG
CCCTCGGCAC CCGCCGAAGT CAATCTGGAT TGGGACATCA GCCAGCGAAC CACGGGAGTG
TTACTCTTGC GGGCCCAGAC CCCAACTCAA CAGCAAACCA TCAAGATTAT CCAGAATTAA
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| Protein sequence | MYLLKPIQML KFYPPTGLDR SATNSFRPDA SWVSRLTCLV VFLLLSLSSP LLAQYNSNAV
TVAGTGTAGS AANQLDSPFG IYVDEAGSMY VADYNNHRVQ KWASGATSGT TVAGTGTAGS
AANQLNHPLG VYVDGAGAIY VSDTDNNRVQ KWASGATSGT TVAGTGTAGS AANQLNYPIG
IYVDGAGATY VADASNSRIQ KWAAGATSGT TVAGGNGQGS AANQLWSAAG VYIDGAGAIY
VADGGNNRIQ KWASGATSGT TVAGTGVYGP ASNQLSYPFA VYVDGAGTMY VSDQQSHRIQ
KWTAGATSGT TVAGGYGNDA LVPYQLNYPR GIYLDRAGAI YVADQRNNRI QKFSRINPLV
NPSLTIATTS QTSCTGASVS FTATSTNGGT SPAYQWKKNG SNVGTSDATY TDAALTSGDV
INCVLTSNDQ WASPTTATSN SLTMTVNPLL TPALTLAITT GSQTSYAGTA ITFTATPING
GTNPRYQWRK NGTNVGTNSA TYTDFALANN DLISCILVSN VTCYTTPTAD SNSLKMTVIA
LVTPTLTIAT GSQTNCAGKS VSFTATPTNG GSSPAYQWKK NGSNVGTNSA TYTDAALANN
DVISCVLTSN APGTTTSTAT SNSLTMTVNP LLTPALTLAI TTGSQTSYAG TAITFTAMPT
NGGTNPAYQW KKNGSNVGTN TATYTDFALA NNDVISCVLT SNVTCPTTPT ATSNDLTMTV
IALVTPTLTI ATTSSQTSCA GTSVSFTATP TNGGSSPAYQ WKKNGSNVGT NTATYTDAAL
ANSDVISCVL TSNAPGTTTS TATSNSLTMT VNARPDAPAL TPASSSLAAT LTPLSLTSFA
LATTGNSLHF FQAGGSELSP PTVSIATAGV MSFSVGQTNN ASGCKSLLTP LSLTITATPT
SQTVCRSSNA TLNVTLVGTA FQWYKNGTTT ANKLTELTSA QRGTTTATLT LVNLQTTADY
YCKITTSTGV QTVGPLKVSV NFGCSARPAA EEADLQLLVL VRPNPIVDGH LRALVKGAQG
QALNVALYSL QGELVNQQVW PSAPAEVNLD WDISQRTTGV LLLRAQTPTQ QQTIKIIQN
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