Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4693 |
Symbol | |
ID | 8728457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5712205 |
End bp | 5713974 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | L-lactate transport |
Protein accession | YP_003389470 |
Protein GI | 284039540 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.880222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0242756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGGA AACAAGTAAT TGACCCATTC AACAACATTA CGTTGTCCGT ACTGGTCGCG TTGATCCCCA TTCTGTTTAT CTTCTGGGCG TTGATCATCC GGAAAATGAA AGGCTATCAG GCCAGTTTGG TAGCCACGGG GCTGGCTATG CTCATTGCCA CCCTGGTGTA TGGTATGCCC GTCGGGCTGG CGCTGCTGTC GGCGGCACAT GGTGCCCTGT ACGGCCTGTT TCCGATCTGC TGGCTGGTGA TCATGGCGGT TTTTCTGTTC AATCTCACTG TGAAAAGCGG GCAGTTCGAA ATCATCAAAT ACTTCATGGG GTCCATTACC GCCGACCGAC GGCTACAGGG ACTGTTGATC GCGTTTTCCT TCGGCTCGTT TCTGGAAGGC ACCGCCGGTT TTGGTGCTCC CGTGGCCATT ACGGCGGCCA TGCTGGTCGG ACTGGGGTTC AACCCGTTGT ATGCGTCGGG CATCTGCCTA ATCGCCAACA CGGCCCCGGT AGCGTTTGGC TCCATCGGCA TTCCCATTAC GGTAGCCTCG CAGGTGTCGG GCATTCCCGA GCTACCCATT TCGCAAATGG TGGGCCGGAC GCTGCCCATC CTCTCCGTCA TGCTGCCGTT TTATCTGGTC AGCATCATTG CCGGATTCCG AAAAGCACGT GAGATATGGC CTGCGGTGGT GGTGTCGGGC GTTTCGTTTG CCTTTCTGCA GTATTTTTCG TCCAACTTCC TCGGCCCCGC CCTCCCCGAT GTCATCGCGG GATTAGGGTC GATTATCTGC CTGATGACCT TCCTGCGCTA TTGGAAACCG AAAACCATCT GGCGTTTTGA TAACGAACCA GCCGCTACAG TCGACACCAG CATCAGCTAC ACCACTGGAC AGGTGATTCG GGCGTGGTCG CCGTTTATCG TGCTCACGAT CATTATCATC TCATGGGGGA TGCAGCCGAT CAAAGATGTG CTCAATTCGG CGGGGATGTT CCAGTTCGAG TTTCCGGGTC TGCACAACGC CATTCTGGGC AGCGACGGCA ACCCGATACC CAAGCTCTTC AAAGTTAACT ACCTCTCAGC AGCCGGAACG GCTATTTTAC TGGCAGCCCT CATCGCTATT CCGCTGGTCG GGCTAACATA CCGAATTGGG TTAACCGTCT TTAAAGAAAC CATCATCCAG TTGCGGTTTC CCATTCTGTC GGTGGCCTCG GTGCTGGCCT TCGCCTATAT TCTGAACGAT TCCGGCATTA CGCTCACACT AGCGGCCGTT CTGGCGAGTA CGGGTCTGCT GTTCCCCTTT TTCGCCCCGG TACTGGGCTG GCTGGGGGTG TTCATTACGG GTTCCGACAC CTCAGCCAAC GCGCTGTTCA GCAAATTGCA GTATGCCACG GCCCAGTCCA TTGGCGTTGA CCCGGTGGTG ACGGTCGCGG CCAACGTGTC GGGGGGCGTG GTTGGTAAAA TGATTTCGCC CCAATCCATT GCCGTAGCAG CCGCAGCCGG GAATCTGGTC GGCAAAGAGT CGCAGTTGTT CCGATTCACG GTGAAACACA GCTTTTACAT GCTGATTTTC ATTAGTTTCC TGACGCTGGC GCAGGCTTAC GTGCTGAAAT GGATGATTCC GGTCTACGAA ATGCTCGACG GTAAGAAAGC CGCCGTCCTG CCGGATTTGA CGAAAGGGTA TCTGTATCTG GGTATATTAG CCGTGGTTTT GGTAGGGATT GGGGTTAGTA TCAGAGCGAT GGCGGGGAAG GATAAACAGA TACCGAAGCT GGTTGATTGA
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Protein sequence | MTWKQVIDPF NNITLSVLVA LIPILFIFWA LIIRKMKGYQ ASLVATGLAM LIATLVYGMP VGLALLSAAH GALYGLFPIC WLVIMAVFLF NLTVKSGQFE IIKYFMGSIT ADRRLQGLLI AFSFGSFLEG TAGFGAPVAI TAAMLVGLGF NPLYASGICL IANTAPVAFG SIGIPITVAS QVSGIPELPI SQMVGRTLPI LSVMLPFYLV SIIAGFRKAR EIWPAVVVSG VSFAFLQYFS SNFLGPALPD VIAGLGSIIC LMTFLRYWKP KTIWRFDNEP AATVDTSISY TTGQVIRAWS PFIVLTIIII SWGMQPIKDV LNSAGMFQFE FPGLHNAILG SDGNPIPKLF KVNYLSAAGT AILLAALIAI PLVGLTYRIG LTVFKETIIQ LRFPILSVAS VLAFAYILND SGITLTLAAV LASTGLLFPF FAPVLGWLGV FITGSDTSAN ALFSKLQYAT AQSIGVDPVV TVAANVSGGV VGKMISPQSI AVAAAAGNLV GKESQLFRFT VKHSFYMLIF ISFLTLAQAY VLKWMIPVYE MLDGKKAAVL PDLTKGYLYL GILAVVLVGI GVSIRAMAGK DKQIPKLVD
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