Gene Slin_4693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4693 
Symbol 
ID8728457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5712205 
End bp5713974 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content55% 
IMG OID 
ProductL-lactate transport 
Protein accessionYP_003389470 
Protein GI284039540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.880222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0242756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGA AACAAGTAAT TGACCCATTC AACAACATTA CGTTGTCCGT ACTGGTCGCG 
TTGATCCCCA TTCTGTTTAT CTTCTGGGCG TTGATCATCC GGAAAATGAA AGGCTATCAG
GCCAGTTTGG TAGCCACGGG GCTGGCTATG CTCATTGCCA CCCTGGTGTA TGGTATGCCC
GTCGGGCTGG CGCTGCTGTC GGCGGCACAT GGTGCCCTGT ACGGCCTGTT TCCGATCTGC
TGGCTGGTGA TCATGGCGGT TTTTCTGTTC AATCTCACTG TGAAAAGCGG GCAGTTCGAA
ATCATCAAAT ACTTCATGGG GTCCATTACC GCCGACCGAC GGCTACAGGG ACTGTTGATC
GCGTTTTCCT TCGGCTCGTT TCTGGAAGGC ACCGCCGGTT TTGGTGCTCC CGTGGCCATT
ACGGCGGCCA TGCTGGTCGG ACTGGGGTTC AACCCGTTGT ATGCGTCGGG CATCTGCCTA
ATCGCCAACA CGGCCCCGGT AGCGTTTGGC TCCATCGGCA TTCCCATTAC GGTAGCCTCG
CAGGTGTCGG GCATTCCCGA GCTACCCATT TCGCAAATGG TGGGCCGGAC GCTGCCCATC
CTCTCCGTCA TGCTGCCGTT TTATCTGGTC AGCATCATTG CCGGATTCCG AAAAGCACGT
GAGATATGGC CTGCGGTGGT GGTGTCGGGC GTTTCGTTTG CCTTTCTGCA GTATTTTTCG
TCCAACTTCC TCGGCCCCGC CCTCCCCGAT GTCATCGCGG GATTAGGGTC GATTATCTGC
CTGATGACCT TCCTGCGCTA TTGGAAACCG AAAACCATCT GGCGTTTTGA TAACGAACCA
GCCGCTACAG TCGACACCAG CATCAGCTAC ACCACTGGAC AGGTGATTCG GGCGTGGTCG
CCGTTTATCG TGCTCACGAT CATTATCATC TCATGGGGGA TGCAGCCGAT CAAAGATGTG
CTCAATTCGG CGGGGATGTT CCAGTTCGAG TTTCCGGGTC TGCACAACGC CATTCTGGGC
AGCGACGGCA ACCCGATACC CAAGCTCTTC AAAGTTAACT ACCTCTCAGC AGCCGGAACG
GCTATTTTAC TGGCAGCCCT CATCGCTATT CCGCTGGTCG GGCTAACATA CCGAATTGGG
TTAACCGTCT TTAAAGAAAC CATCATCCAG TTGCGGTTTC CCATTCTGTC GGTGGCCTCG
GTGCTGGCCT TCGCCTATAT TCTGAACGAT TCCGGCATTA CGCTCACACT AGCGGCCGTT
CTGGCGAGTA CGGGTCTGCT GTTCCCCTTT TTCGCCCCGG TACTGGGCTG GCTGGGGGTG
TTCATTACGG GTTCCGACAC CTCAGCCAAC GCGCTGTTCA GCAAATTGCA GTATGCCACG
GCCCAGTCCA TTGGCGTTGA CCCGGTGGTG ACGGTCGCGG CCAACGTGTC GGGGGGCGTG
GTTGGTAAAA TGATTTCGCC CCAATCCATT GCCGTAGCAG CCGCAGCCGG GAATCTGGTC
GGCAAAGAGT CGCAGTTGTT CCGATTCACG GTGAAACACA GCTTTTACAT GCTGATTTTC
ATTAGTTTCC TGACGCTGGC GCAGGCTTAC GTGCTGAAAT GGATGATTCC GGTCTACGAA
ATGCTCGACG GTAAGAAAGC CGCCGTCCTG CCGGATTTGA CGAAAGGGTA TCTGTATCTG
GGTATATTAG CCGTGGTTTT GGTAGGGATT GGGGTTAGTA TCAGAGCGAT GGCGGGGAAG
GATAAACAGA TACCGAAGCT GGTTGATTGA
 
Protein sequence
MTWKQVIDPF NNITLSVLVA LIPILFIFWA LIIRKMKGYQ ASLVATGLAM LIATLVYGMP 
VGLALLSAAH GALYGLFPIC WLVIMAVFLF NLTVKSGQFE IIKYFMGSIT ADRRLQGLLI
AFSFGSFLEG TAGFGAPVAI TAAMLVGLGF NPLYASGICL IANTAPVAFG SIGIPITVAS
QVSGIPELPI SQMVGRTLPI LSVMLPFYLV SIIAGFRKAR EIWPAVVVSG VSFAFLQYFS
SNFLGPALPD VIAGLGSIIC LMTFLRYWKP KTIWRFDNEP AATVDTSISY TTGQVIRAWS
PFIVLTIIII SWGMQPIKDV LNSAGMFQFE FPGLHNAILG SDGNPIPKLF KVNYLSAAGT
AILLAALIAI PLVGLTYRIG LTVFKETIIQ LRFPILSVAS VLAFAYILND SGITLTLAAV
LASTGLLFPF FAPVLGWLGV FITGSDTSAN ALFSKLQYAT AQSIGVDPVV TVAANVSGGV
VGKMISPQSI AVAAAAGNLV GKESQLFRFT VKHSFYMLIF ISFLTLAQAY VLKWMIPVYE
MLDGKKAAVL PDLTKGYLYL GILAVVLVGI GVSIRAMAGK DKQIPKLVD