Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4692 |
Symbol | |
ID | 8728456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5709836 |
End bp | 5712001 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389469 |
Protein GI | 284039539 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.852935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0295008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGAA GAGAATTTAT CAAGACCACC GGCCTGATTG GCGGGGCCTA TGCGCTGGCG GGTCAGCCGT TGATGGCCAA CGCCTTGTCG CCAACGGAAA CGCGCTGGCT CGACGGGCCG ATGCGGTGGG CACAATTGGC GTTTGTGGAG CGTGACCCCG GCCATTACGA CCCCGATTTC TGGCTGAGTT ACTTCAAACG GATTCATGCC GACGGGGCTT TGCTCAGTGC CGGGGGCGTG GTCGCTTTTT ACCCGACCAA CATCCCACTG CATCACCGAA GCGATTATCT GGGCAACACC GATACGCTGG GTTATCTGGT GGAAGGCTGC AAAAAACAGG GCATAAAAAT CATGCTCCGC ACCGATCCTC ATGCCGCCCG CCAGAATGTG TACGATGCCC ACCCCGACTG GATTGCGGTC AACGTCGATG GTACCAAACG CCGTCACTGG GCCAATCCCG ACTTGTGGGT CACCTGCTCG CTTGGGCCGT ACAACTTCGA GTTTATGCCG CAGGTGAATA AAGAGATCAT GGAGCGATTC CAGCCCGAGG GCATTTTCTC GAACCGATGG GCCGGTCACG ACATCTGCTA CTGCGAACAC TGCACCCGCA ATTTCAAAGC GGCTACCGGT CTGGCGTTAC CGCAAAAAAT AGAACGACTC GACCCCACCT ACCGCAAATG GGCCGACTGG CGAACCAAAC GACTGCGGGA AGTATGGGCC TTGTGGGATG CCGGTATTCG GCAACAGCGG CCCGCGTCCC GGTTCATCCC CAACGGCTTT CCCGACAAGA TCGTCACCGG CAAAGAAGCC GACCTTTTCT TCGCTGATCA ACAGGCCCGG CGGGGGCTCA TGGCTCCCTG GGCCAATGGC AAAGGAGCCA AGGAACTACG CTCGACGCTG GGGATGAAAC CCCTGATTGG CATTTTCAGC GTAGGTATCG AAGAAGAATA CCGCTGGAAA GACTCCGTCC AGAGCGACGC CGAAATCCGT ATCTGGGTGG CCGAAGGAAC GGCCAACGGG ATGCGGCCGT GCTTCGTTAA GTTCGGGGGC GACATCTACG ACAAACGCTG GATGGAGGCC GTGGCAAAGG TCTACGAAGG TTACCACAAA AACGAAAAGT ACCTCTGCAA TACCGCGTCG ATGGCGCGTG TCGGTGTCGT TTACTCCGAG CAGACCGACC GCAACTACGG CGGCAAACCC TGGCAGCAGA AAAGCAGCGA CCACCTCGAC GGCATCTACC AGACCCTCGT TGAAAGTCGG ATTCCGTTCG ATATGGTGAA CGACCGGCTG CTTACGCCCG ACGATCTGAA GCGGTTCAAG CTGCTGATTC TGCCTAACAT TGCCGCCCTT TCCGATAGCC AGTGTGCGCA GTTACAAGCG TTCGTCAACG GGGGCGGCAG TCTGATGGCG ACCTTCGAAA CGTCGCTGTA CGACGAAGAA GGCAACCAAC GTCCGGACTT TGGTCTGGCC AACCTCTTTG GGGTGTCGTA TGCCGGTAAG GTAGAAGGGC CGATGCGAAA CAGTTACCTG CACCTACGCC ACGACGCCAA AAACAGCCAG AGCCAGGCGA TTCTGAAAGG GCTGGACGGT ACACCCCGCA TCATAAACGC CATTCATAAA GTTGATGTAA AGCCTACAGC CACCTTCCCC AGTCCGGTTA CGCTCATTCC GACCTACCCC GATTTGCCCA TGGAAGATGT GTACCCGCGC GTGGCCGAAA CCGATACGCG GGAGCTGTAT TTGCGGCAAG TGGGGAAAGG CCGCGTCGCG TACATTCCCG GCGATCTGGA CCGCTCGTTC TGGCAACTGC TCAATGTCGA TCACGGGCAA TTGCTGAGCA ACGTCATTCA CTGGACCCTC GACGAAGCGC CCATAGCCGC CGTAACCGGG CCGGGCGTGA TCGATGTCAA CGTCTGGCGA CAGGCGAATT CGATGACCGT CCATCTGGTC AACCTGACAA ATCCGATGAT GATGAAAGGC CCGTTTCGGG AGTTGATTCC GGTGGATGCA CAGGTGTCGG TTCAGGTGCC TAAGGGTGCA AAGGTGACGG GCGTAAAACT GCTAATGAGC GGGCAGAAGC CCAAATTTGA AAGCAAAAAC GGAAAGGTAT CGGTAAGCGT GCCGAAGGTT CTCGACCACG AGATTGTGGC GCTGGATCTG GCGTGA
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Protein sequence | MERREFIKTT GLIGGAYALA GQPLMANALS PTETRWLDGP MRWAQLAFVE RDPGHYDPDF WLSYFKRIHA DGALLSAGGV VAFYPTNIPL HHRSDYLGNT DTLGYLVEGC KKQGIKIMLR TDPHAARQNV YDAHPDWIAV NVDGTKRRHW ANPDLWVTCS LGPYNFEFMP QVNKEIMERF QPEGIFSNRW AGHDICYCEH CTRNFKAATG LALPQKIERL DPTYRKWADW RTKRLREVWA LWDAGIRQQR PASRFIPNGF PDKIVTGKEA DLFFADQQAR RGLMAPWANG KGAKELRSTL GMKPLIGIFS VGIEEEYRWK DSVQSDAEIR IWVAEGTANG MRPCFVKFGG DIYDKRWMEA VAKVYEGYHK NEKYLCNTAS MARVGVVYSE QTDRNYGGKP WQQKSSDHLD GIYQTLVESR IPFDMVNDRL LTPDDLKRFK LLILPNIAAL SDSQCAQLQA FVNGGGSLMA TFETSLYDEE GNQRPDFGLA NLFGVSYAGK VEGPMRNSYL HLRHDAKNSQ SQAILKGLDG TPRIINAIHK VDVKPTATFP SPVTLIPTYP DLPMEDVYPR VAETDTRELY LRQVGKGRVA YIPGDLDRSF WQLLNVDHGQ LLSNVIHWTL DEAPIAAVTG PGVIDVNVWR QANSMTVHLV NLTNPMMMKG PFRELIPVDA QVSVQVPKGA KVTGVKLLMS GQKPKFESKN GKVSVSVPKV LDHEIVALDL A
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