Gene Slin_4692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4692 
Symbol 
ID8728456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5709836 
End bp5712001 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389469 
Protein GI284039539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.852935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0295008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGAA GAGAATTTAT CAAGACCACC GGCCTGATTG GCGGGGCCTA TGCGCTGGCG 
GGTCAGCCGT TGATGGCCAA CGCCTTGTCG CCAACGGAAA CGCGCTGGCT CGACGGGCCG
ATGCGGTGGG CACAATTGGC GTTTGTGGAG CGTGACCCCG GCCATTACGA CCCCGATTTC
TGGCTGAGTT ACTTCAAACG GATTCATGCC GACGGGGCTT TGCTCAGTGC CGGGGGCGTG
GTCGCTTTTT ACCCGACCAA CATCCCACTG CATCACCGAA GCGATTATCT GGGCAACACC
GATACGCTGG GTTATCTGGT GGAAGGCTGC AAAAAACAGG GCATAAAAAT CATGCTCCGC
ACCGATCCTC ATGCCGCCCG CCAGAATGTG TACGATGCCC ACCCCGACTG GATTGCGGTC
AACGTCGATG GTACCAAACG CCGTCACTGG GCCAATCCCG ACTTGTGGGT CACCTGCTCG
CTTGGGCCGT ACAACTTCGA GTTTATGCCG CAGGTGAATA AAGAGATCAT GGAGCGATTC
CAGCCCGAGG GCATTTTCTC GAACCGATGG GCCGGTCACG ACATCTGCTA CTGCGAACAC
TGCACCCGCA ATTTCAAAGC GGCTACCGGT CTGGCGTTAC CGCAAAAAAT AGAACGACTC
GACCCCACCT ACCGCAAATG GGCCGACTGG CGAACCAAAC GACTGCGGGA AGTATGGGCC
TTGTGGGATG CCGGTATTCG GCAACAGCGG CCCGCGTCCC GGTTCATCCC CAACGGCTTT
CCCGACAAGA TCGTCACCGG CAAAGAAGCC GACCTTTTCT TCGCTGATCA ACAGGCCCGG
CGGGGGCTCA TGGCTCCCTG GGCCAATGGC AAAGGAGCCA AGGAACTACG CTCGACGCTG
GGGATGAAAC CCCTGATTGG CATTTTCAGC GTAGGTATCG AAGAAGAATA CCGCTGGAAA
GACTCCGTCC AGAGCGACGC CGAAATCCGT ATCTGGGTGG CCGAAGGAAC GGCCAACGGG
ATGCGGCCGT GCTTCGTTAA GTTCGGGGGC GACATCTACG ACAAACGCTG GATGGAGGCC
GTGGCAAAGG TCTACGAAGG TTACCACAAA AACGAAAAGT ACCTCTGCAA TACCGCGTCG
ATGGCGCGTG TCGGTGTCGT TTACTCCGAG CAGACCGACC GCAACTACGG CGGCAAACCC
TGGCAGCAGA AAAGCAGCGA CCACCTCGAC GGCATCTACC AGACCCTCGT TGAAAGTCGG
ATTCCGTTCG ATATGGTGAA CGACCGGCTG CTTACGCCCG ACGATCTGAA GCGGTTCAAG
CTGCTGATTC TGCCTAACAT TGCCGCCCTT TCCGATAGCC AGTGTGCGCA GTTACAAGCG
TTCGTCAACG GGGGCGGCAG TCTGATGGCG ACCTTCGAAA CGTCGCTGTA CGACGAAGAA
GGCAACCAAC GTCCGGACTT TGGTCTGGCC AACCTCTTTG GGGTGTCGTA TGCCGGTAAG
GTAGAAGGGC CGATGCGAAA CAGTTACCTG CACCTACGCC ACGACGCCAA AAACAGCCAG
AGCCAGGCGA TTCTGAAAGG GCTGGACGGT ACACCCCGCA TCATAAACGC CATTCATAAA
GTTGATGTAA AGCCTACAGC CACCTTCCCC AGTCCGGTTA CGCTCATTCC GACCTACCCC
GATTTGCCCA TGGAAGATGT GTACCCGCGC GTGGCCGAAA CCGATACGCG GGAGCTGTAT
TTGCGGCAAG TGGGGAAAGG CCGCGTCGCG TACATTCCCG GCGATCTGGA CCGCTCGTTC
TGGCAACTGC TCAATGTCGA TCACGGGCAA TTGCTGAGCA ACGTCATTCA CTGGACCCTC
GACGAAGCGC CCATAGCCGC CGTAACCGGG CCGGGCGTGA TCGATGTCAA CGTCTGGCGA
CAGGCGAATT CGATGACCGT CCATCTGGTC AACCTGACAA ATCCGATGAT GATGAAAGGC
CCGTTTCGGG AGTTGATTCC GGTGGATGCA CAGGTGTCGG TTCAGGTGCC TAAGGGTGCA
AAGGTGACGG GCGTAAAACT GCTAATGAGC GGGCAGAAGC CCAAATTTGA AAGCAAAAAC
GGAAAGGTAT CGGTAAGCGT GCCGAAGGTT CTCGACCACG AGATTGTGGC GCTGGATCTG
GCGTGA
 
Protein sequence
MERREFIKTT GLIGGAYALA GQPLMANALS PTETRWLDGP MRWAQLAFVE RDPGHYDPDF 
WLSYFKRIHA DGALLSAGGV VAFYPTNIPL HHRSDYLGNT DTLGYLVEGC KKQGIKIMLR
TDPHAARQNV YDAHPDWIAV NVDGTKRRHW ANPDLWVTCS LGPYNFEFMP QVNKEIMERF
QPEGIFSNRW AGHDICYCEH CTRNFKAATG LALPQKIERL DPTYRKWADW RTKRLREVWA
LWDAGIRQQR PASRFIPNGF PDKIVTGKEA DLFFADQQAR RGLMAPWANG KGAKELRSTL
GMKPLIGIFS VGIEEEYRWK DSVQSDAEIR IWVAEGTANG MRPCFVKFGG DIYDKRWMEA
VAKVYEGYHK NEKYLCNTAS MARVGVVYSE QTDRNYGGKP WQQKSSDHLD GIYQTLVESR
IPFDMVNDRL LTPDDLKRFK LLILPNIAAL SDSQCAQLQA FVNGGGSLMA TFETSLYDEE
GNQRPDFGLA NLFGVSYAGK VEGPMRNSYL HLRHDAKNSQ SQAILKGLDG TPRIINAIHK
VDVKPTATFP SPVTLIPTYP DLPMEDVYPR VAETDTRELY LRQVGKGRVA YIPGDLDRSF
WQLLNVDHGQ LLSNVIHWTL DEAPIAAVTG PGVIDVNVWR QANSMTVHLV NLTNPMMMKG
PFRELIPVDA QVSVQVPKGA KVTGVKLLMS GQKPKFESKN GKVSVSVPKV LDHEIVALDL
A