Gene Slin_4676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4676 
Symbol 
ID8728440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5696518 
End bp5697486 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content51% 
IMG OID 
Productpolysaccharide deacetylase 
Protein accessionYP_003389453 
Protein GI284039523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.629157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.272149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATC CATATTTATT AACTATGTTC AGTCGTCAAA CTCTTTCTTT TGCTGCGGCC 
TTTGGGCTCT CTGTTTTGCT TGCCAATGGT CTGTCGGGTT GTCAGTCAAA AGGTTCGGCA
ACAACCGAAA CCACCGCCGA TTCGGCAGCT ACCACATCCG GTAACCCGTC AACGGCCGAA
AAACCAGCCG ACAAAAAGGC GGAAGTCCCT GTAGCCGCTG TGCCTGACCC ATCGAGCATC
CCAGCCAATA AAATCGCTGA TGCCGCTACC ATTCTGGCCC GGCCACAGGT GCCTGTTTTG
TGCTATCACC AGATTCGCGA CTGGCGGGCC AGCGATTCTA AATCGGCCAA AGACTACATT
ATACCGGTAG CGGCTTTCCG CGAACAGATG AAAATGCTGG CCGATAGTGG TTACCATACC
ATTCTGCCGG ACCAACTGTA TGCATACCTG ACAACCGGAG CGCCGTTGCC CTCCAAACCA
ATCATGCTGA CTTTCGATGA TGGCGACCTC GACCAATACA CGGTAGCCGC TCCCGAACTC
GAAAAACACG GTTTCAAAGG CGCGTTCTTC ATTATGACTG TAGCGATTGG CCGACATGGT
AAGCAGCCGT ATATGGACAA AGCCCAGATC AAAGACCTAT CAGATCGCGG CCATGCCATT
GGCGCCCATA CCTGGGATCA CCATAACGTA AAGAAATACC AGGGTGACGA TTGGAAGATC
CAAATCGAAG AACCCAAGGC GAAGCTGGAA ACCATCATTG GAAAACCCAT TAAGTATTTT
GCGTATCCGT TCGGTTTGTG GAATAAACAG GCACTGCCCG AACTACAGAA ACGGGGGTAT
GTGGCTGCAT TCACGCTGGC CGATAAGCGG GACGACAGTA TGCCACTCTA CACCGTTCGC
CGGATTATTG CCGGGGGCCA GTGGAAAGCC ACGACCATGT ACCGGAATAT GATTCAGAGT
TTTGACTAA
 
Protein sequence
MFDPYLLTMF SRQTLSFAAA FGLSVLLANG LSGCQSKGSA TTETTADSAA TTSGNPSTAE 
KPADKKAEVP VAAVPDPSSI PANKIADAAT ILARPQVPVL CYHQIRDWRA SDSKSAKDYI
IPVAAFREQM KMLADSGYHT ILPDQLYAYL TTGAPLPSKP IMLTFDDGDL DQYTVAAPEL
EKHGFKGAFF IMTVAIGRHG KQPYMDKAQI KDLSDRGHAI GAHTWDHHNV KKYQGDDWKI
QIEEPKAKLE TIIGKPIKYF AYPFGLWNKQ ALPELQKRGY VAAFTLADKR DDSMPLYTVR
RIIAGGQWKA TTMYRNMIQS FD