Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4676 |
Symbol | |
ID | 8728440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5696518 |
End bp | 5697486 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | polysaccharide deacetylase |
Protein accession | YP_003389453 |
Protein GI | 284039523 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.629157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.272149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGATC CATATTTATT AACTATGTTC AGTCGTCAAA CTCTTTCTTT TGCTGCGGCC TTTGGGCTCT CTGTTTTGCT TGCCAATGGT CTGTCGGGTT GTCAGTCAAA AGGTTCGGCA ACAACCGAAA CCACCGCCGA TTCGGCAGCT ACCACATCCG GTAACCCGTC AACGGCCGAA AAACCAGCCG ACAAAAAGGC GGAAGTCCCT GTAGCCGCTG TGCCTGACCC ATCGAGCATC CCAGCCAATA AAATCGCTGA TGCCGCTACC ATTCTGGCCC GGCCACAGGT GCCTGTTTTG TGCTATCACC AGATTCGCGA CTGGCGGGCC AGCGATTCTA AATCGGCCAA AGACTACATT ATACCGGTAG CGGCTTTCCG CGAACAGATG AAAATGCTGG CCGATAGTGG TTACCATACC ATTCTGCCGG ACCAACTGTA TGCATACCTG ACAACCGGAG CGCCGTTGCC CTCCAAACCA ATCATGCTGA CTTTCGATGA TGGCGACCTC GACCAATACA CGGTAGCCGC TCCCGAACTC GAAAAACACG GTTTCAAAGG CGCGTTCTTC ATTATGACTG TAGCGATTGG CCGACATGGT AAGCAGCCGT ATATGGACAA AGCCCAGATC AAAGACCTAT CAGATCGCGG CCATGCCATT GGCGCCCATA CCTGGGATCA CCATAACGTA AAGAAATACC AGGGTGACGA TTGGAAGATC CAAATCGAAG AACCCAAGGC GAAGCTGGAA ACCATCATTG GAAAACCCAT TAAGTATTTT GCGTATCCGT TCGGTTTGTG GAATAAACAG GCACTGCCCG AACTACAGAA ACGGGGGTAT GTGGCTGCAT TCACGCTGGC CGATAAGCGG GACGACAGTA TGCCACTCTA CACCGTTCGC CGGATTATTG CCGGGGGCCA GTGGAAAGCC ACGACCATGT ACCGGAATAT GATTCAGAGT TTTGACTAA
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Protein sequence | MFDPYLLTMF SRQTLSFAAA FGLSVLLANG LSGCQSKGSA TTETTADSAA TTSGNPSTAE KPADKKAEVP VAAVPDPSSI PANKIADAAT ILARPQVPVL CYHQIRDWRA SDSKSAKDYI IPVAAFREQM KMLADSGYHT ILPDQLYAYL TTGAPLPSKP IMLTFDDGDL DQYTVAAPEL EKHGFKGAFF IMTVAIGRHG KQPYMDKAQI KDLSDRGHAI GAHTWDHHNV KKYQGDDWKI QIEEPKAKLE TIIGKPIKYF AYPFGLWNKQ ALPELQKRGY VAAFTLADKR DDSMPLYTVR RIIAGGQWKA TTMYRNMIQS FD
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