Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4672 |
Symbol | |
ID | 8728436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5690576 |
End bp | 5693401 |
Gene Length | 2826 bp |
Protein Length | 941 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | PKD domain containing protein |
Protein accession | YP_003389449 |
Protein GI | 284039519 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.612479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAA TAATCGTATC ATTGTGTTTA AAATACGCTT TAGAAATGAC ATATAAACGT TATACCCTTC AATCGTTCCG AACGACGGCC TTGCTCAGTG TAGGCGCCCT AGGCTTATGG GCCTACTCGA CGAGGTCGTT CACCGCTCCC GGCGATAAAC CCGACGAAAA TCGGTTTACA AAGGTAGTAC TTGCCGAAAA ACTAAATGAG CCGCTCGAAA TGGCCATTCT ACCCGACGAA CGCGTACTGT TTATCGAACG GCATGGGCAG GTTCAACTGT ATTCGCCAGG TACGAAACAG GTGAAAACGA TTGCTTCAAT CCCGGTCAGC ACGAAATATA AAGATGTTGA AGGACATGAG ACCGAAGCTG AAGATGGTTT GCTGGGCGTT AACATAGACC CCAACTTCGA GAAAAACCAC TGGATATACC TATACTACTC ACCAGCGGGC AGCGAATCTA AGAACAGTCT GGTCCGCTAC GAAATGCGGG GCGACGAACT GGTTCTATCT TCGAAAAAAG TGTTGCTGGA TGTACCCGTG CAGCGCGAAC AATGCTGCCA TACCAGTGGC TCCATTGACT GGGACCGCGA AGGCAACCTC TATCTCTCTA CCGGCGACAA CACCAGCCCC CGCGCCACGC TCTACGCACC TATTGACGAG CGGCCCGGCC GGGGTCCTTG GGATGCCCAG AAGTCGTCGG GTAATACTAA TGATTTGCGG GGTAAAATCC TCCGTATCCA TCCCGAAGCC GACGGAACTT ACACCATTCC CGAAGGAAAC CTGTTTCCAA AAGGCACAAG CCAAACCCGT CCCGAGATCT ATACCATGGG CCACCGTAAC CCCTACAGGA TTTCGGTAGA TAAGCATACA GGGTATGTGT ACTGGGGCGA TGTAGGCCCC GACGCGGGCG AAGATTCGGT TGGGGTTGGC CCCACGGCCG AAGACGAATA CAACCAGGCG CGAAAAGCGG GCAATTTCGG CTGGCCGTAT TTTGTGGGCG ATAATAAAGC CTATTACGAT AAAGATTTCA CCACCGGAAA AGGAGGTGCC AAATTCGATC CGGCGCATCC GGTCAACGAT TCGCCCAACA ACACGGGCCT GCGCGACCTC CCGCCTGCCC AGCCTGCGCT CATCTCTTAC CCGGCTGCCG AGTCCAAAAA ATTTCCGATC ATGGGAACCG GTGGGCGTAG TGCTATGGCC GGTCCTACCT ATTACAAAGA CGATTTCAAG AACGCCAAAC GCCCTTTCCC GGACTATTAT AACGGAAAAG TATTTCTCTA TGAGTGGATG CGCGACATGA TTATGGCCGT TGACTTTGAT GGCAAGGGTG GCATAACCAG CATGGAACGC TTTCTGCCCA ACATGGGCTT CAGTCACCCA ATCGACATGG CGTTCGGGCC AAACGGTGAT TTATACGTGC TGGAATACGG CACCGGCTGG TTCCTCAAAA ACGACGATTC GCGTTTGGTA CGCATTGAGT TCAACGCGGG CAATCGTAAG CCTGCGATAC AGGTAGCGGC CAGTCAGAAG GCAGGGGCGG TACCGCTGAA AGTAGCCTTG TCATCGGAGG GAACCAAGGA TTTCGATGGC GATGCGCTGA CCTATCAATG GAAAATAGTG AGCCGAACGG GTGGTCAGCC AACCGTTCTG AATGAACCGA ACCCAACGTT CACGTTTCAG AAACCGGGAC AGTATAAAGC GATACTGACA GTAACCGATG CGAAGGGTCT GAAAGATACC CAGGAGGTGG ATATTGTAGC CGGTAACCAG CCTCCGCAGG TAGCCCTGAA CGTAGTGAAC GGCAATAAGA GCTTCTATTT CCCCGGCCAG CCGGTGGCTT ATCAGGTAAA CGTGACCGAT AAGGAAGATG GTAGCCTGGC GAGTGGACGC ATTCAGCCTA AACAAGTGCT GGTTCGGGCT ACGTATCAGG ATGACGCCAA CGCACAGGCC GCGAGTACAT CCGGTGCTGG ACACAAATTC TCCGAGGCCG CTTACCTGGG GACCGGGCAA ACGCTCATGG AAAAAAGTGA CTGCAAAGCC TGCCATTTTA CGGATAAAAA ATCGGTAGGA CCCGCGTTTA CGGAAGTAGC GAAACGGTAC AAAGCTGATG CCAACGCCGT GGCGAGCCTA TCGAATAAGA TCATCAAAGG GGGGGGTGGC GTTTGGGGCG ATGCCATCAT GACGGCCCAC CCTCAACTGA CTCAGCCCGA CGCGAGCGAA ATTGTCAAGT ATATCCTGAC CCTTTCCGAC AAGAAAGTGA CAGCCCCGCT GCTCCCGACG AAGGGAACCT ATACGCCGGG TAAAGACGAA AAAGGAAATC TGGTTTTGCA GGCCTCTTAC AAAGATAAAG GAGCTAACGG CCTGCCTGCC CAACTGGCCG AACAGGTACT GGTGCTACGG AATCCGCTGA TCGCGCTGGG CACATCCAAT AGCCAGTCGA AAGGCATCAC ACTGTTCAAA ATGGGCACTC AGCCTTACCC GCTTGTGGTT GTCATGGGTT CCGACACCTA TGTCAAATTT AACCAGCTCG ACCTTACCGG TATCCGATCC ATGGAGTTTG CCGTAGCCGC CCCTAAAGCG CAGTTGAACG CTATGGGTGG TCGAATTGAA GTACGGATTG ACTCCCCAAC GGGCCAACTG CTGGGCCAGA CGGCAGAGGT TGCGCCCAAT GAAAGCAAAG ACCCGGCCGC CATGTTTACG CCAACTATGG CCAAAGCAGC CATTATTCCA ACAACGGGCC AGCACGACCT GTACTTCGTT TTCAAAAACG AGAAGGCCGG AAAAGCCCCT CTTTTCGTAC CCAGTACGGT TCAACTTTCC AACTAA
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Protein sequence | MKEIIVSLCL KYALEMTYKR YTLQSFRTTA LLSVGALGLW AYSTRSFTAP GDKPDENRFT KVVLAEKLNE PLEMAILPDE RVLFIERHGQ VQLYSPGTKQ VKTIASIPVS TKYKDVEGHE TEAEDGLLGV NIDPNFEKNH WIYLYYSPAG SESKNSLVRY EMRGDELVLS SKKVLLDVPV QREQCCHTSG SIDWDREGNL YLSTGDNTSP RATLYAPIDE RPGRGPWDAQ KSSGNTNDLR GKILRIHPEA DGTYTIPEGN LFPKGTSQTR PEIYTMGHRN PYRISVDKHT GYVYWGDVGP DAGEDSVGVG PTAEDEYNQA RKAGNFGWPY FVGDNKAYYD KDFTTGKGGA KFDPAHPVND SPNNTGLRDL PPAQPALISY PAAESKKFPI MGTGGRSAMA GPTYYKDDFK NAKRPFPDYY NGKVFLYEWM RDMIMAVDFD GKGGITSMER FLPNMGFSHP IDMAFGPNGD LYVLEYGTGW FLKNDDSRLV RIEFNAGNRK PAIQVAASQK AGAVPLKVAL SSEGTKDFDG DALTYQWKIV SRTGGQPTVL NEPNPTFTFQ KPGQYKAILT VTDAKGLKDT QEVDIVAGNQ PPQVALNVVN GNKSFYFPGQ PVAYQVNVTD KEDGSLASGR IQPKQVLVRA TYQDDANAQA ASTSGAGHKF SEAAYLGTGQ TLMEKSDCKA CHFTDKKSVG PAFTEVAKRY KADANAVASL SNKIIKGGGG VWGDAIMTAH PQLTQPDASE IVKYILTLSD KKVTAPLLPT KGTYTPGKDE KGNLVLQASY KDKGANGLPA QLAEQVLVLR NPLIALGTSN SQSKGITLFK MGTQPYPLVV VMGSDTYVKF NQLDLTGIRS MEFAVAAPKA QLNAMGGRIE VRIDSPTGQL LGQTAEVAPN ESKDPAAMFT PTMAKAAIIP TTGQHDLYFV FKNEKAGKAP LFVPSTVQLS N
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