Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4671 |
Symbol | |
ID | 8728435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5689760 |
End bp | 5690533 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | NUDIX hydrolase |
Protein accession | YP_003389448 |
Protein GI | 284039518 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.695959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGTACA AAAAGCAAAT AGAGCGGCTA ATCATCGATT TCAAAACCAA TTACCTTTCT TCTGTATCCA TCGACTTTGT TATATTCGGA TTTCATGATG GCCAGTTAAA AGTGCTTTTG TTGCGTTGGA AAGAAACCGA CAAGTGGTGC CTGCCGGGTG GGCGGGTTCG TCATAATGAA AATCTGGAAG CAGCCGCTTA CCGAAGTTTA CAGGAGCGGA CGGGTCTTGG CGAAATTTTT CTGCAGCAAT TCCACACTTT TGGCGATGTG ATGCGGTATA CCCATTTCAG CAAAGAAGAA ACCATGGGCA AACTGGGACT GTCGCAGGAT GCGCTGAATG ATTTTCCGGG CCGCGATGTA TCGGTCGGTT ATTACGCGCT GGTCGAATTT GCCCGGGTAA CGCCCACCCC CGATCTGTTT ACGGATGAAT GCCAGTGGTG GGACATCGAT CAGATTCCGC TTTTGCTTTT TGACCATAAT GCCATGATTA CCCTGGCCCT GAAAACCCTG CGTCGGCAGT TGAGCTACCA GCCCATAGGC TATAATTTGT TGCCGGAGAA GTTCACCATG CCCGATTTGC AGCAATTGTA TGAAACAATT CTGGGGCAAA CGCTCGACCG GCGTAATTTT CAAAAGCGTA TTTTGGGGTA CGATATCCTG GATCGGCTGG ACGAACGCAA GACCGGAGGG GCGCATAAAG CGCCGTACTT ATATCGTTTT AATAAGGAGA AATACGAAAA AGCGCTGGAA GATGAGGTAC TTTTTGTCGG ATAG
|
Protein sequence | MEYKKQIERL IIDFKTNYLS SVSIDFVIFG FHDGQLKVLL LRWKETDKWC LPGGRVRHNE NLEAAAYRSL QERTGLGEIF LQQFHTFGDV MRYTHFSKEE TMGKLGLSQD ALNDFPGRDV SVGYYALVEF ARVTPTPDLF TDECQWWDID QIPLLLFDHN AMITLALKTL RRQLSYQPIG YNLLPEKFTM PDLQQLYETI LGQTLDRRNF QKRILGYDIL DRLDERKTGG AHKAPYLYRF NKEKYEKALE DEVLFVG
|
| |